MidgeBase gene description page [Pn.09706]
Outline
| Gene ID | Pn.09706 |
| Type | Protein coding gene |
| Scaffold | PnScaf10057 |
| Start | 457 |
| End | 5265 |
| Direction | + |
Sequence
Transcript: 1080 (bp)
ATGTCCGGTAAATCGCCGTGCTCATTCCTTCGAAACAATCCGTTGGGACATTTTCAGCAAAAAGGAGGAACTTGTCGTGCGGTGACGCGTTCTCCCGTCGACTTTCGCGAGGGTCGTCGCGCAAGTGACGGTCTTGTCGCTCAAGGAATTTTAAGCCAAGTCGATAATCAACTGAACTCGGTTGCATTCAATAGTCAACGATTGCACGAGGCATGCAAGGCTAAAGGCGTTCTCGAATTGCACCTTCTTCAGCAAGAAGCGGCGCAGCTTTCATCTCAGTATCAGTCTATTGTGCCTGTCGATGAAATGAATGTGCGCCAGATGCAACATAGTCAATTCTACGTGACACCAGCGAAAACGGCCGGTGAACTTACTCTAAACAATGGTGGCGGAAACAACTTTGGTGGATTCAAAAACAACTCTCAAGAAAGTTCGTGTTATTTCAACAAGTCTGTGAGTGGAATTACATCGGATATAAACACGTATGTGGGAATGATGAAAAATGACCTCACAAAGCATGATAATGTGGATTTTAGTGGCGGAAAGCACATCTCAATCAAAGCCGATTCGCAAATAATTCCCTCATCTTCGTCTATTCAAAAGCCTCCGCTGCAACAACAGTTGATGCAACATCGCTTGTTGCAGCAAAAGCGTCAGATACTTCAAAAACAGGGTGCCCTTGAAACAGGTCTGAACGGAATTAGTCGAAGACAAATGCTGCGACAGCAAAGTTACAAGATTGCACAGACTCAACAAATTCTGCCACCTCTCCCGTTTCCACTTAGTGAAAGCGAATCTGAGGATTTATTAGCGTTTCAACAAATTGTAGAAAATCCATCCTCTCCGCCATCATCGCACACTACATCGCCAAAGTTACTAAAAACGACTCATCTGCACAGCAATAATAGCCAAGGTGTATTGTCTTTGTCGCCACAGCAAGTTACTGGCTTATCTAATAATCTACAGAGCTGTCAAATAAGTGATGGTTCAGCAACTAATACGCACGATATATTCCATCAAACTCTTTTTCATCAGTTCATTGTCGTAAATCATGCAACAATCTGGCCTCAAATAACAGAT
Protein: 360 (aa)
MSGKSPCSFLRNNPLGHFQQKGGTCRAVTRSPVDFREGRRASDGLVAQGILSQVDNQLNSVAFNSQRLHEACKAKGVLELHLLQQEAAQLSSQYQSIVPVDEMNVRQMQHSQFYVTPAKTAGELTLNNGGGNNFGGFKNNSQESSCYFNKSVSGITSDINTYVGMMKNDLTKHDNVDFSGGKHISIKADSQIIPSSSSIQKPPLQQQLMQHRLLQQKRQILQKQGALETGLNGISRRQMLRQQSYKIAQTQQILPPLPFPLSESESEDLLAFQQIVENPSSPPSSHTTSPKLLKTTHLHSNNSQGVLSLSPQQVTGLSNNLQSCQISDGSATNTHDIFHQTLFHQFIVVNHATIWPQITD
| Type | Start | End | Length |
| CDS |
457 |
1491 |
1035 |
| CDS |
5218 |
5262 |
45 |
| intron |
1492 |
5217 |
3726 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR20612 |
hypothetical protein AND_19793 [Anopheles darlingi] |
1e-54 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC007481 |
| A. mellifera |
GB14629-PA |
| H. sapiens |
ENSP00000305976 |
| H. sapiens |
ENSP00000270162 |
| D. plexippus |
DPOGS206646PA |
| S. invicta |
SI2.2.0_14211 |
| P. vanderplanki |
Pv.01213 |
| D. melanogaster |
FBgn0025625 |
| H. melpomene |
HMEL011136-PA |
| N. vitripennis |
NV10722-PA |
| P. humanus |
PHUM287820-PA |
| A. gambiae |
AGAP003005 |
| M. musculus |
ENSMUSG00000037112 |
| M. musculus |
ENSMUSG00000024042 |
| A. gambiae |
AGAP013439 |