MidgeBase gene description page [Pn.09672]
Outline
| Gene ID | Pn.09672 |
| Type | Protein coding gene |
| Scaffold | PnScaf10017 |
| Start | 84169 |
| End | 85967 |
| Direction | + |
Sequence
Transcript: 1443 (bp)
ATGTTGCCATCAGAATACAAGATTTTTCACGAAAGCTTCATGAAAAATAACAACGGCACAACTGCCTTCGATAGCTTCTTATACATAATTCCGAGTAGTTTTGCTATATTCCACACCATAACGTTAACAACAGTACTTAAACTCAACAATAACAGCAGCGTACCAGCGAGATTTGTTGTCGAATTTGTCACAATTTGTCTGAGTTTGGTTCTCTACACTACAGTTTTTAGTGATGCAATCAGTCACATCGTCTTTACGCTCATTCTCATCACAATTGCCTCTATTGTGAAGCAATTGCATGGCAAATGTCACCTCACACCGTTTGTGCAAATTCCTGCAATTCTACCCGACTTCATAACAGTCGGAAGATCTATCATCAGTTTAATCACTGCCGTTTGCATATTGGCCGTCGATTTTCAGTGCTTTCCCCGTAAACTGGCGAAAACTGAGAAGTTTGGCTTTGGACTCATGGATGTAGGCGTTGGACTTTTCATTTTTTCGAACGGGATCGTTGTGAAACCGTCGGCAGCAGCATTTTCAAAGAAGAAATTTCAGAAGCTTCTCGTGTCATGCTTGCCACTCTTTATTTTGGGTTTCTCGAGGCTGGTCCTTACGAAAGAGATAAATTATCACGAACATGTGACGGAATATGGAGCGCATTGGAACTTTTTCATAACGCTAGCAGTGACAAAAATTTTCGGGACTGTCTTGGAGGGCTTCATGAAGACGGCCGAACACATAAAATACTCGGCACTCATGCTCCTGATGTTACACGAAACATGTCTCCAACTGGGTCTCTCCAACTACATCATGGACGACAATGTTGCTCGCAACAACTTGATTGCGGCAAATCGCGAAGGCATCTTCTCGACGCCCGGCTATGTGGCACTTTACTTGTCGTCCATCTACATCGGAACCCTGTTGAAGTCCGACGGACAAGAGCTGCTGAAGGTTCGCGAAGTTTTCTACAAAGCAATCAAGCTGGGCCTGACTTCGGCTTTCTGCTGGAAAATGATTTTCGTGTGCAACGGAATGTTCGGAGTGTCGAGGCGAAGCGCCAACATGGGATATGCTTTTTGGGTGTTGGCGGTGGGCACCTCGATGATGACGCTCTTCATGCTCATCGAAATGTTCATCTACTACACGAATTTCAATCGGCCTCAGTGGCAGCAAATGGAACCGAGCACAAAAGCGCAGACAAAGGCACAATTGAACGAACCCGAACACGAGATTCCATACGTGCCGCTGATTTTGCGCGCAATCAACTACAATGGGCTGGCATTTTTCCTCATCGCGAACCTCTTCACGGGAATCGTCAACGTGTGCTTTCAAACAATGCTTCTCGGAAATTCTGCCTCCATACTCATAATCACCTACTACACATTCTTGCTAAATGTCATTATGGTATTCTTATACGTTAACAAGTTCAAACTCAAGATATGG
Protein: 481 (aa)
MLPSEYKIFHESFMKNNNGTTAFDSFLYIIPSSFAIFHTITLTTVLKLNNNSSVPARFVVEFVTICLSLVLYTTVFSDAISHIVFTLILITIASIVKQLHGKCHLTPFVQIPAILPDFITVGRSIISLITAVCILAVDFQCFPRKLAKTEKFGFGLMDVGVGLFIFSNGIVVKPSAAAFSKKKFQKLLVSCLPLFILGFSRLVLTKEINYHEHVTEYGAHWNFFITLAVTKIFGTVLEGFMKTAEHIKYSALMLLMLHETCLQLGLSNYIMDDNVARNNLIAANREGIFSTPGYVALYLSSIYIGTLLKSDGQELLKVREVFYKAIKLGLTSAFCWKMIFVCNGMFGVSRRSANMGYAFWVLAVGTSMMTLFMLIEMFIYYTNFNRPQWQQMEPSTKAQTKAQLNEPEHEIPYVPLILRAINYNGLAFFLIANLFTGIVNVCFQTMLLGNSASILIITYYTFLLNVIMVFLYVNKFKLKIW
| Type | Start | End | Length |
| CDS |
84169 |
84529 |
361 |
| CDS |
84617 |
84718 |
102 |
| CDS |
84985 |
85964 |
980 |
| intron |
84530 |
84616 |
87 |
| intron |
84719 |
84984 |
266 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001657815 |
hypothetical protein AaeL_AAEL006445 [Aedes aegypti] gb|EAT41970.1| conserved hypothetical protein [Aedes aegypti] |
1e-138 |
| InterPro |
IPR009447 |
GWT1 |
|
| Gene Ontology(BP) |
GO:0006506 |
GPI anchor biosynthetic process |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(CC) |
GO:0005789 |
endoplasmic reticulum membrane |
|
| Gene Ontology(MF) |
GO:0016746 |
transferase activity, transferring acyl groups |
|
| Pfam |
PF11980.3 |
Domain of unknown function (DUF3481) |
0.091 |
| Pfam |
PF06423.7 |
GWT1 |
3.7e-35 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0031422 |
| P. vanderplanki |
Pv.11230 |
| H. sapiens |
ENSP00000468778 |
| A. mellifera |
GB16306-PA |
| H. sapiens |
ENSP00000455647 |
| D. melanogaster |
FBgn0035265 |
| A. gambiae |
AGAP009280 |
| M. musculus |
ENSMUSG00000045140 |
| H. sapiens |
ENSP00000332313 |
| P. humanus |
PHUM137550-PA |
| T. castaneum |
TC014480 |
| C. quinquefasciatus |
CPIJ004213 |
| H. sapiens |
ENSP00000389847 |
| N. vitripennis |
NV17738-PA |
| A. aegypti |
AAEL006445 |