MidgeBase gene description page [Pn.09531]
Outline
| Gene ID | Pn.09531 |
| Type | Protein coding gene |
| Scaffold | PnScaf9808 |
| Start | 20262 |
| End | 21258 |
| Direction | + |
Sequence
Transcript: 696 (bp)
ATGAGTGAACATAGCTTTAATGCATCGGAATGGAAAAGTCTATCCTTCACGTTAGTCGAGTATCCAGTTGACGATGTTTTCGGGAAGTTTATGGCGATACTGGCGTTGGCTCCTCTCTACATCGGTGCAGTCTTCTCGGGGCTGGCTCTCAGATCGCGCGATTTGCATACGATCTTCTACTTTATCGGCATTCTACTCAACGAAGCTTTAAACATGGGACTCAAGTATTTAATAAAAGAGCCGCGTCCAGCGCTGAGACAGAATTACTATGTCAAGTACGGCATGCCCAGCTCGCATGCACAATTCATGCTCTTCTTCACCACGTACACAATCCTCTTCCTCTTCAAACGACTGCATCAAAACTCTCTGATCGAGAGAATATTCCGCGGTGTCTTTGTGCTAGTGTTGCTTGTGGTGTCGGCGCTCGTGTGCTACGGTCGGCTGTATCTGATGTATCACACGCTCAGTCAAGTCGTAGTCGGCTCGTTGATCGGTTTAGCGACCGGACTCATCTGGTTCGCCTTCGTGCATTCAATTCTCACTCCATACGTGTTTCCTCGCATCGTGTCATGGAAGATCTCGGAGCTTTTACTCATTCGTGATACGTCGCTTATTCCCAACATTCTTTTCTTCGAATACACTGCCACGCGACAGGAGAGCAGGGCGCGACTGAGGAAGAACATGAACAAGATGCAA
Protein: 232 (aa)
MSEHSFNASEWKSLSFTLVEYPVDDVFGKFMAILALAPLYIGAVFSGLALRSRDLHTIFYFIGILLNEALNMGLKYLIKEPRPALRQNYYVKYGMPSSHAQFMLFFTTYTILFLFKRLHQNSLIERIFRGVFVLVLLVVSALVCYGRLYLMYHTLSQVVVGSLIGLATGLIWFAFVHSILTPYVFPRIVSWKISELLLIRDTSLIPNILFFEYTATRQESRARLRKNMNKMQ
| Type | Start | End | Length |
| CDS |
20262 |
20331 |
70 |
| CDS |
20460 |
20560 |
101 |
| CDS |
20670 |
20848 |
179 |
| CDS |
20910 |
21255 |
346 |
| intron |
20332 |
20459 |
128 |
| intron |
20561 |
20669 |
109 |
| intron |
20849 |
20909 |
61 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001664281 |
hypothetical protein AaeL_AAEL003874 [Aedes aegypti] gb|EAT44794.1| conserved hypothetical protein [Aedes aegypti] |
2e-70 |
| InterPro |
IPR016118 |
Phosphatidic acid phosphatase/chloroperoxidase, N-terminal |
|
| InterPro |
IPR000326 |
Phosphatidic acid phosphatase type 2/haloperoxidase |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF04956.8 |
TrbC/VIRB2 family |
1.2 |
| Pfam |
PF01569.16 |
PAP2 superfamily |
2.8e-16 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000026856 |
| S. invicta |
SI2.2.0_80255 |
| C. quinquefasciatus |
CPIJ003606 |
| D. plexippus |
DPOGS214225PA |
| T. castaneum |
TC013393 |
| P. humanus |
PHUM463840-PA |
| A. aegypti |
AAEL003874 |
| P. vanderplanki |
Pv.13815 |
| N. vitripennis |
NV10259-PA |
| H. sapiens |
ENSP00000361625 |
| A. mellifera |
GB14842-PA |
| H. sapiens |
ENSP00000384043 |
| H. melpomene |
HMEL015638-PA |
| A. gambiae |
AGAP002666 |