MidgeBase gene description page [Pn.09425]

Outline

Link to gbrowse

Gene ID Pn.09425
Type Protein coding gene
Scaffold PnScaf9658
Start 59021
End 62508
Direction +

Sequence

Transcript: 1128 (bp)

 ATGGGTGGATGTACATCGAAAGACAAAACGGTCGCTGAAAATGAAGGTAACAAGTCCGAAATGGTTGACGCTGCAGTTCTTGAGAAATTGGAAGCCGGCTTCACTAAGCTCGCCGCATCCGACTCGAAATCATTGCTTAAGAAGTACTTGACCAAGGAAGTCTTCGACAGTCTTAAGAACAAGAAGACACCAACCTTCGGCTCAACTCTGCTTGATGTCATCCAATCTGGATATGAGAACCACGACTCTGGCGTTGGTATCTACGCTCCAGATGCCGAGGCTTACACAACCTTCGCTGAATTGTTCGACCCAATCATTGAGGACTACCATGGTGGCTTCAAGAAGACCGACAAGCATCCAGCAAAGGACTTCGGTGATGTCAACGCCTTCGGCGATTTGGATCCAACTGGTGAATTTGTCGTCTCAACACGTGTTCGCTGCGGTCGCTCAATGGAGGGATATCCATTCAACCCATGCTTGACTGAGGCCCAATACAAAGAAATGGAACAAAAAGTTTCAACCACATTGTCGGGCTTGGAAGGTGAATTGAAGGGCAAGTTCTACCCATTGACTGGCATGGACAAGTCTACTCAACAACAACTCATCGACGACCACTTCCTGTTCAAGGAAGGTGATCGCTTCTTGCAAGCCGCCAACGCTTGCCGCTACTGGCCATCAGGTCGCGGTATCTACCACAACGATGCCAAGACCTTCCTTGTCTGGTGCAATGAGGAGGATCACTTGCGTATCATCTCCATGCAAATGGGTGGCAACCTCGGTGAAGTTTTCCGCCGCTTGACAACTGCCGTCAATGACATTGAGAAGCGTATTCCATTCAGCCACAACGACCGCTTGGGATTCCTTACATTCTGCCCAACCAACTTGGGAACCACCATCCGTGCATCGGTGCACATCAAGGTCCCGAAATTGGCTGCCAACAAGGCTCGCCTCGAGGAAGTTGCTGCCAAGTACAACTTGCAAGTCCGTGGAACTCGCGGAGAACACACAGAGGCTGAGGGTGGCATTTATGATATTTCAAATAAGAGACGTATGGGCTTGACTGAATTCCAAGCTGTCAAGGAGATGTACGATGGCATTACTGAAATCATCAAGATCGAGAAGTCATTG 

Protein: 376 (aa)

 MGGCTSKDKTVAENEGNKSEMVDAAVLEKLEAGFTKLAASDSKSLLKKYLTKEVFDSLKNKKTPTFGSTLLDVIQSGYENHDSGVGIYAPDAEAYTTFAELFDPIIEDYHGGFKKTDKHPAKDFGDVNAFGDLDPTGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEQKVSTTLSGLEGELKGKFYPLTGMDKSTQQQLIDDHFLFKEGDRFLQAANACRYWPSGRGIYHNDAKTFLVWCNEEDHLRIISMQMGGNLGEVFRRLTTAVNDIEKRIPFSHNDRLGFLTFCPTNLGTTIRASVHIKVPKLAANKARLEEVAAKYNLQVRGTRGEHTEAEGGIYDISNKRRMGLTEFQAVKEMYDGITEIIKIEKSL 
Type Start End Length
CDS 59021 59067 47
CDS 61115 61543 429
CDS 61620 61866 247
CDS 61961 62098 138
CDS 62169 62390 222
CDS 62461 62505 45
intron 59068 61114 2047
intron 61544 61619 76
intron 61867 61960 94
intron 62099 62168 70
intron 62391 62460 70

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr XP_315641 AGAP005627-PB [Anopheles gambiae str. PEST] ref|XP_001688698.1| AGAP005627-PA [Anopheles gambiae str. PEST] gb|EAA44056.3| AGAP005627-PB [Anopheles gambiae str. PEST] gb|EDO63704.1| AGAP005627-PA [Anopheles gambiae str. PEST] 0.0
InterPro IPR000749 ATP:guanido phosphotransferase
InterPro IPR022413 ATP:guanido phosphotransferase, N-terminal
InterPro IPR022415 ATP:guanido phosphotransferase active site
InterPro IPR022414 ATP:guanido phosphotransferase, catalytic domain
InterPro IPR014746 Glutamine synthetase/guanido kinase, catalytic domain
Gene Ontology(MF) GO:0016301 kinase activity
Gene Ontology(MF) GO:0003824 catalytic activity
Gene Ontology(MF) GO:0016772 transferase activity, transferring phosphorus-containing groups
Pfam PF13618.1 Gluconate 2-dehydrogenase subunit 3 0.089
Pfam PF00217.14 ATP:guanido phosphotransferase, C-terminal catalytic domain 7.6e-108
Pfam PF02807.10 ATP:guanido phosphotransferase, N-terminal domain 3e-34

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID

Orthologous genes

Species Gene ID
H. sapiens ENSP00000413999
H. sapiens ENSP00000299198
A. gambiae AGAP005627
M. musculus ENSMUSG00000030399
H. sapiens ENSP00000406577
H. melpomene HMEL009645-PA
S. invicta SI2.2.0_04961
H. sapiens ENSP00000221476
M. musculus ENSMUSG00000021622
H. sapiens ENSP00000254035
H. sapiens ENSP00000416717
D. melanogaster FBgn0035957
D. melanogaster FBgn0000116
H. sapiens ENSP00000389267
T. castaneum TC002600
H. sapiens ENSP00000300283
H. sapiens ENSP00000410289
H. sapiens ENSP00000404203
H. sapiens ENSP00000413255
N. vitripennis NV12741-PA
A. mellifera GB10973-PA
B. mori BGIBMGA005812-TA
D. plexippus DPOGS215720PA
T. castaneum TC013596
P. humanus PHUM616180-PA
A. aegypti AAEL009185
M. musculus ENSMUSG00000001270
C. quinquefasciatus CPIJ007538
H. sapiens ENSP00000413165
P. vanderplanki Pv.04065