MidgeBase gene description page [Pn.09390]
Outline
| Gene ID | Pn.09390 |
| Type | Protein coding gene |
| Scaffold | PnScaf9603 |
| Start | 17816 |
| End | 22611 |
| Direction | - |
Sequence
Transcript: 3159 (bp)
ATGTTGGTTAAGCAGTTAATTTTGCTGAGCAGCTTTTTGCTGTTCATTTCGGCGAATCCTCAGCGATATCCGCACGTGCCAACCTCGCAGTACGATGAGGATTTGCACCGCCTTTCGGATCTCGGAATGCATCCGCACGAAGCTCAGGAATCTAAGCGAATGTCGGCGAAATCAACCGCGAATATTGATGAACTAACGAAGAAGTTTTGGATGGAAAACGCAATGAATTTCGTCGAAAAGCAGGCAGCAAAGACAGCGAACAAAAAAAAGGCCAAAAATATAATTTTTTTCTTGGGCGACGGCATGGGCCACACATCCATCGCGGCCGCTCGCGTGGCCATGGGCGGCGAGGAGAAGAAACTCTCTTTTGAGAACTTCCCGCACGTCGCCAGCGCCAAGACTTTCTGCGTGAACGCGCAAGTGCCCGACTCCGCGTGCACCATCACCTCGCTCTTGCACGGAGTCAACACAAACGCAGGTGTGATCGGCCTCAATGCGGCCACCACACGCGCCAACTGCGCCGATCACGTCACCGCGAGCAAAAGCACGAAATCCATTGCCGAACTTTTCCTCGAAAGCGACCGAAGTGCAGGCGTCGTGACGACCACTCGAATCACTCACGCCACGCCGGCCGGCGTGTATGCGCACACGGCGAATCGCGACTGGGAAGGCAACGCAAATGTCGCCTCTAGCGGCTGCAACCATCAGCAACTCGACGACATCGCTGAGCAGCTCGTGCACGGCGCAGTCGGCTCAAAGTTGAAGGTCATTCTTGGTGGCGGCTCCTCCTTTTTCGTCAATGCCTCGACTCTCGATCACGGCATGAATGGCCGGCGAACAGACGGCAAGAACCTGATTCAAGAGTGGCTCGCTACCGACTCGGGAAGGAGGAGTTTCGTGCGAAATCGAGACGAGTTGATGGCAGCGAAAATTGACGAAGTCGATCAGCTCTTCGGCTTGTTCAACAGCGACCATCTGCCCTATCAGCTCGAGGTTGAAGAGAGGAATCAGCAGAGCATCTACCCGACTCTCACCAATATGACAATGAAGGCGATCGACGTGCTGAGCAAGGACGATGAAGGCTACTTTTTGCTGGTCGAGAGCGGCAGAATTGATCATGCACACCATGCCGCGCAGGCACGATTGGCGGTTGGTGAGACGATTGAATTTCAAAATGCCATCCAAGCTACGGTCGATAGGGTGAATCTCGACAAGACTCTGATTGTTGTGACGGCAGATCACAGCCACACAATGACGATTAGCGGATACGCGGCAAGAGGAGGTGACATTTTCGGAACGACGGGTGTCGCGGAGGACGGCATGCCATATTTTGTTCTTTCCTACGCCAATGGACCAGGCTACTCAGCTAATCGCGTTCAAGGCAGCAATTCCCGCGTGAGTCCAGCGCTTCTCGATTCTTCGTCGCTCTACTTCAGATATCCCGGGACAGTGCCGCTGGTTGATGAGACACATGCTGGCGAGGATGTCGGCTTGTGGGCCATTGGACCGAACTCTCATATCTTCAAGGGTGTGCTCGAACAGAGCGTGGTGGCGCATGCAATGGCTTATGCTAGCTGTGTTGCCAGTCCGAAACGATATTCAAATGCACAAAAGTCACAGTTTGATGGCGATCTCTACAGGCTATCGGACATTGGAACGCACCCGCACATGAAGGAAAATTTTCAGTCACAAAAACGACTGTCAGGCAAATCTATGGCAGAAAACCCAGAATTTACCAAAGAATACTGGATTGAGAACGCAAAAATCTTTGTGGAAAGACAAATAGCAAAGAAAGTAAACAGGAAAAAAGCCAAAAATATAATTTTATTCCTTGGCGATGGCATGGGCCACACATCCATCACCGCCGCTCGTGTCGTTCTCGGCGGTGAAGAAAAGAAGCTGGCTTTCGAAAACTTTCCTCATGTCGCGAGCGCAAAGACCTACTGCGTGAACGTCCAAGTGCCAGACTCTGCGTGCACCATCACTTCACTTCTGCATGGCGTGAAAACCAACCGAGGAACAATCGGCATCAACGCCAATGCAAGTCGCTACAGCTGCGACGACCACCGAATGCCCAGCAAGTTCACAAACTCCATTGCCAAGTGGTTTCTCGACGACGACAGAAGCGTCGGTGTCGTAACGACCACGCGAGTAACTCACGCCATCCCGGCCGGCGTCTACGCCCACACAACCGAACGCGACTGGGAGGGCAATGCCGAGGTTGCGAGCAGCGGGTGCAACGACTTGCTGGTGGATGACGTCGCTGAGCAGCTGATTTATGGAAAAATCGGGAAGAAATTGAAGGTCGTTTTGGGCGGAGGTTCGAGTTTTTTCGTGAACACATCGACAATCGAGCATGGCGCGTATGGCAAGCGAACGGACGGCAAGAACTTGATGAGCGAGTGGCTGAAGGGAAAATCGAGGAGAAAATTGGTGAGAAATCGCGAGGAATTGATGGAAGTCGACAGCGAGGAGGTCGGGCAGTTGCTTGGACTGTTCAGCAGCAGTCACATGCCGTTCCAACTGGAAGTCGAGGAAAACCAGCAGCAGAGCATTTACCCGACACTCACCGAGATGACAGTGAAGGCCATTGACGTGCTGAATGAAAACGACGACGGCTACTTTTTGCTGGTCGAGGGCGGCCGAATCGACCAAGGCCATCACTACGCTCAGGCGCGTCTGGCGATCGGGGAAACTGTTGAATTTCACAGGGCGGTTGAGGCGGCTGTTGAGAAGGTGAATCTCGAGGAAACTCTCATCATTGTGACTGGCGATCACAGCCATCCGATGACAATCGGTGGATATTCGCTCAGAGGAAGCGACATCTTCGGACCAGCGAATTTTCACAGTGAGGCAAAAGACGGCATGCCCTACTTTACCATCTCCTATGCCAACGGCCCGGGCTATCCCATCCACCGATCCCCGAGCAACAACTCGCGCGTCGATCCAACACACCTCGATTCATCCTCGCTTCACTTCCGGTTCCCAGCGACCGTCCCAATGGTTGAAACAACGCATTCCGGCGAGGACGTGGGTCTGTGGGCGATCGGACCAAACGCACACCTCTTCAAAGGCGTGATCGAGCAAAACACAGTGGTGCATGTGATGGCCTACGCTAGCTGTGTCGGCGACGGATTAGCGGCTTGCGATAACTTCCAT
Protein: 1053 (aa)
MLVKQLILLSSFLLFISANPQRYPHVPTSQYDEDLHRLSDLGMHPHEAQESKRMSAKSTANIDELTKKFWMENAMNFVEKQAAKTANKKKAKNIIFFLGDGMGHTSIAAARVAMGGEEKKLSFENFPHVASAKTFCVNAQVPDSACTITSLLHGVNTNAGVIGLNAATTRANCADHVTASKSTKSIAELFLESDRSAGVVTTTRITHATPAGVYAHTANRDWEGNANVASSGCNHQQLDDIAEQLVHGAVGSKLKVILGGGSSFFVNASTLDHGMNGRRTDGKNLIQEWLATDSGRRSFVRNRDELMAAKIDEVDQLFGLFNSDHLPYQLEVEERNQQSIYPTLTNMTMKAIDVLSKDDEGYFLLVESGRIDHAHHAAQARLAVGETIEFQNAIQATVDRVNLDKTLIVVTADHSHTMTISGYAARGGDIFGTTGVAEDGMPYFVLSYANGPGYSANRVQGSNSRVSPALLDSSSLYFRYPGTVPLVDETHAGEDVGLWAIGPNSHIFKGVLEQSVVAHAMAYASCVASPKRYSNAQKSQFDGDLYRLSDIGTHPHMKENFQSQKRLSGKSMAENPEFTKEYWIENAKIFVERQIAKKVNRKKAKNIILFLGDGMGHTSITAARVVLGGEEKKLAFENFPHVASAKTYCVNVQVPDSACTITSLLHGVKTNRGTIGINANASRYSCDDHRMPSKFTNSIAKWFLDDDRSVGVVTTTRVTHAIPAGVYAHTTERDWEGNAEVASSGCNDLLVDDVAEQLIYGKIGKKLKVVLGGGSSFFVNTSTIEHGAYGKRTDGKNLMSEWLKGKSRRKLVRNREELMEVDSEEVGQLLGLFSSSHMPFQLEVEENQQQSIYPTLTEMTVKAIDVLNENDDGYFLLVEGGRIDQGHHYAQARLAIGETVEFHRAVEAAVEKVNLEETLIIVTGDHSHPMTIGGYSLRGSDIFGPANFHSEAKDGMPYFTISYANGPGYPIHRSPSNNSRVDPTHLDSSSLHFRFPATVPMVETTHSGEDVGLWAIGPNAHLFKGVIEQNTVVHVMAYASCVGDGLAACDNFH
| Type | Start | End | Length |
| CDS |
17819 |
18169 |
351 |
| CDS |
18229 |
19175 |
947 |
| CDS |
19239 |
19493 |
255 |
| CDS |
19559 |
19582 |
24 |
| CDS |
20583 |
20892 |
310 |
| CDS |
21231 |
22180 |
950 |
| CDS |
22236 |
22481 |
246 |
| CDS |
22536 |
22611 |
76 |
| intron |
18170 |
18228 |
59 |
| intron |
19176 |
19238 |
63 |
| intron |
19494 |
19558 |
65 |
| intron |
19583 |
20582 |
1000 |
| intron |
20893 |
21230 |
338 |
| intron |
22181 |
22235 |
55 |
| intron |
22482 |
22535 |
54 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR27951 |
hypothetical protein AND_04782 [Anopheles darlingi] |
0.0 |
| InterPro |
IPR017849 |
Alkaline phosphatase-like, alpha/beta/alpha |
|
| InterPro |
IPR001952 |
Alkaline phosphatase |
|
| InterPro |
IPR017850 |
Alkaline-phosphatase-like, core domain |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF00245.15 |
Alkaline phosphatase |
4.7e-238 |
| Pfam |
PF09294.5 |
Interferon-alpha/beta receptor, fibronectin type III |
0.13 |
| Pfam |
PF09953.4 |
Uncharacterized protein conserved in bacteria (DUF2187) |
0.00036 |
| Pfam |
PF01095.14 |
Pectinesterase |
0.002 |
| Pfam |
PF00884.18 |
Sulfatase |
0.011 |
| Pfam |
PF01676.13 |
Metalloenzyme superfamily |
0.0043 |
| Pfam |
PF10546.4 |
P63C domain |
0.084 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.09388 |
| Pn.09389 |
| Pn.02025 |
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL013037-PC |
| B. mori |
BGIBMGA008824-TA |
| D. melanogaster |
FBgn0038845 |
| M. musculus |
ENSMUSG00000036500 |
| H. sapiens |
ENSP00000437674 |
| P. vanderplanki |
Pv.09902 |
| P. vanderplanki |
Pv.08606 |
| P. vanderplanki |
Pv.09101 |
| A. gambiae |
AGAP007300 |
| D. melanogaster |
FBgn0035620 |
| A. aegypti |
AAEL003298 |
| P. vanderplanki |
Pv.08097 |
| P. vanderplanki |
Pv.00915 |
| H. melpomene |
HMEL013037-PB |
| B. mori |
BGIBMGA014304-TA |
| P. vanderplanki |
Pv.08194 |
| P. vanderplanki |
Pv.00914 |
| H. sapiens |
ENSP00000363965 |
| H. melpomene |
HMEL013037-PA |
| D. plexippus |
DPOGS215263PA |
| A. mellifera |
GB18702-PA |
| B. mori |
BGIBMGA009866-TA |
| C. quinquefasciatus |
CPIJ002095 |
| P. vanderplanki |
Pv.12469 |
| D. melanogaster |
FBgn0037083 |
| A. gambiae |
AGAP010596 |
| M. musculus |
ENSMUSG00000026246 |
| H. melpomene |
HMEL013752-PA |
| A. aegypti |
AAEL003905 |
| D. melanogaster |
FBgn0043791 |
| C. quinquefasciatus |
CPIJ018121 |
| P. humanus |
PHUM129520-PA |
| H. sapiens |
ENSP00000295463 |
| A. aegypti |
AAEL009077 |
| T. castaneum |
TC006657 |
| H. sapiens |
ENSP00000442672 |
| C. quinquefasciatus |
CPIJ001263 |
| T. castaneum |
TC006658 |
| N. vitripennis |
NV12172-PA |
| M. musculus |
ENSMUSG00000079440 |
| D. plexippus |
DPOGS215259PA |
| D. melanogaster |
FBgn0016123 |
| H. sapiens |
ENSP00000394765 |
| H. sapiens |
ENSP00000375881 |
| H. sapiens |
ENSP00000363973 |
| P. vanderplanki |
Pv.00912 |
| B. mori |
BGIBMGA008818-TA |
| A. gambiae |
AGAP011302 |
| H. melpomene |
HMEL016167-PA |
| A. aegypti |
AAEL003297 |
| D. plexippus |
DPOGS200817PA |
| A. gambiae |
AGAP001684 |
| H. melpomene |
HMEL016348-PA |
| A. aegypti |
AAEL000931 |
| A. aegypti |
AAEL003286 |
| T. castaneum |
TC006659 |
| H. sapiens |
ENSP00000295453 |
| B. mori |
BGIBMGA009872-TA |
| D. plexippus |
DPOGS200818PA |