MidgeBase gene description page [Pn.09387]
Outline
| Gene ID | Pn.09387 |
| Type | Protein coding gene |
| Scaffold | PnScaf9603 |
| Start | 10468 |
| End | 12426 |
| Direction | - |
Sequence
Transcript: 1614 (bp)
ATGAATCGAAGGAATTTAGTGTTTGTGGCCGTTGTCGTGATATTCTCGTGCACGAGTGGAGATGAGTACCACAGTAAAAAGCTGCGAAAGGTTCCGATGGCGCTGAAGAATGAGCAAGAGAAGTCGACCGAGTACTGGCTGAGTCAAGGTCAGTCGAAATTGCAGGAGTTGGTGGGCCAGAAACTGAACACAAACAACGCCAAAAACGTCATCATGTTTGTCGGTGACGGCATGAGCTTCGCCACAATCGCAACGGCTCGTATGGTTTTGGGCGGCGAAGAGGAAAATCTGTACTTCGAGAACTTCCCCTACAACGGCTTCTCAAAGACTTACTGTGTGGATGCACAAGTAGCCGACTCCGCGTGCACAACGACCGCCTATCTCAGCGGCATCAAAACAAACTACGAAGTTATCGGCTTGACGGCGAAAGCCAAGGTGCAGGACTGCGACGCGCAACTCGACACCGAGCTGTGGACTGAGAGCGTCCTTCGTTGGTCGCAAAAGTCATGCAAGGCAACTGGCATCGTCACAAACACGCGAATCACGCATGCGAGTCCCTCGGGTGCTTACGCGCACGTCGCTGAACGCGACTGGGAGAATGACTTTGAGGTCGAAGAGACCAAGTGCGATGCCAACAAGGTCGATGACATTGCTGAGCAGCTCGTGCATGGCGTTGAGGGAAGGAACTTGAAGGTCGTCTTGGGAGGCGGAAGAGCAAACTTCAGAGGCCAAACAGTGATCGATGAGGAAGGAAAACCTGGCTATCGCACGGACGGAAAGGACCTGATCGAGGAGTGGAAAGAGGAGCGCTCAAAGGACGGAAAAGCGACTTACGTGTGGAACCGCCAAGGCCTCAACGCCGTCGACTTCAACAACACAGACTTTTTGCTCGGCCTCTTCGAGAGCGACCACATGAAGTACCACAAGGACGTCGTCGCAAACAATCTGGTCGAGAGCGAGCCGACGCTCAGCGAAATGACAATGGCGGCCATCAAGATGCTGCAGAGAGAGGAAAACGGCTACTTCCTCTTTGTCGAGGGCGGAATGATCGATCAGGCGCATCACTACAACTACGCACAGGTCGCCTTGGACGAAACGATTGAGTTCCAGAAGGCGGTTAAAGTTGCGCGTGAAATGACCAACGAGGAGGACACGCTCGTTGTTGTGACTGCCGACCACTCGCATGTTTTTACTTACAATGGATATCCGTTGCGCGGCAGCAACATCTTCACAGCCAACGACGACAGCGACATCGATTTCATGCCGTACCTAACGCTCAGCTACGCCAACGGTCCGGGCTACAATTCGATGTACGAGCCAGACGGAAGTCGCAAAGACCCAACAAACTTCGACTATAGCAACCACAAGATGCAATACCCATCGACAGCACCTCTCGAGAAGGAAACGCACGGCGGTGAAGACGTCGGCGTTTACGCGAGTGGACCGATGGCGCACCTCTTCAGCGGTCACTACGAACAGAATGCGATCCCGCTGCTGATGGCCTACATTCTCAAGGTCGGTCCCTACGCCGAGGATGAAAAATGTTCGAGTGCTGCAGCGGTGCCTTTGATGATGCTTACTCTATTTATGATTTTGGTTGTTAAGTTTCTGAGA
Protein: 538 (aa)
MNRRNLVFVAVVVIFSCTSGDEYHSKKLRKVPMALKNEQEKSTEYWLSQGQSKLQELVGQKLNTNNAKNVIMFVGDGMSFATIATARMVLGGEEENLYFENFPYNGFSKTYCVDAQVADSACTTTAYLSGIKTNYEVIGLTAKAKVQDCDAQLDTELWTESVLRWSQKSCKATGIVTNTRITHASPSGAYAHVAERDWENDFEVEETKCDANKVDDIAEQLVHGVEGRNLKVVLGGGRANFRGQTVIDEEGKPGYRTDGKDLIEEWKEERSKDGKATYVWNRQGLNAVDFNNTDFLLGLFESDHMKYHKDVVANNLVESEPTLSEMTMAAIKMLQREENGYFLFVEGGMIDQAHHYNYAQVALDETIEFQKAVKVAREMTNEEDTLVVVTADHSHVFTYNGYPLRGSNIFTANDDSDIDFMPYLTLSYANGPGYNSMYEPDGSRKDPTNFDYSNHKMQYPSTAPLEKETHGGEDVGVYASGPMAHLFSGHYEQNAIPLLMAYILKVGPYAEDEKCSSAAAVPLMMLTLFMILVVKFLR
| Type | Start | End | Length |
| CDS |
10471 |
10875 |
405 |
| CDS |
10940 |
11455 |
516 |
| CDS |
11557 |
11922 |
366 |
| CDS |
12036 |
12301 |
266 |
| CDS |
12366 |
12426 |
61 |
| intron |
10876 |
10939 |
64 |
| intron |
11456 |
11556 |
101 |
| intron |
11923 |
12035 |
113 |
| intron |
12302 |
12365 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663539 |
alkaline phosphatase [Aedes aegypti] gb|EAT45426.1| alkaline phosphatase [Aedes aegypti] |
1e-144 |
| InterPro |
IPR017849 |
Alkaline phosphatase-like, alpha/beta/alpha |
|
| InterPro |
IPR001952 |
Alkaline phosphatase |
|
| InterPro |
IPR017850 |
Alkaline-phosphatase-like, core domain |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF00245.15 |
Alkaline phosphatase |
4.7e-127 |
| Pfam |
PF11824.3 |
Protein of unknown function (DUF3344) |
0.021 |
| Pfam |
PF01663.17 |
Type I phosphodiesterase / nucleotide pyrophosphatase |
0.00055 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.04871 |
| Pn.09386 |
| Pn.00739 |
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL003313 |
| A. gambiae |
AGAP011305 |
| P. vanderplanki |
Pv.00917 |
| P. vanderplanki |
Pv.00913 |
| D. melanogaster |
FBgn0035619 |
| D. melanogaster |
FBgn0033423 |
| C. quinquefasciatus |
CPIJ001265 |
| P. vanderplanki |
Pv.17345 |
| A. aegypti |
AAEL003289 |
| A. aegypti |
AAEL003309 |
| C. quinquefasciatus |
CPIJ001264 |
| P. vanderplanki |
Pv.00916 |