MidgeBase gene description page [Pn.09313]
Outline
| Gene ID | Pn.09313 |
| Type | Protein coding gene |
| Scaffold | PnScaf9415 |
| Start | 29663 |
| End | 31260 |
| Direction | + |
Sequence
Transcript: 1410 (bp)
ATGAATCGCTTCTGCGTGATTTTGTTAATTGTTGTGAACGCAATCGGCGTACTCTCACAAGAGGAGTATTGCTACTCTAATGACAATGATAAGAAGCAGTCAAAGCAGTATGGAACAAAGACGGCCTACGAAATTTCACGTGGAACCGACAAAAAATACTTTAACGTTCCGAAATGTGAAGCTGTGAAATTCTGGCTCATGAGTCGACATGGAACCAGAAACCCGTCAGCAAAGAGTATCGAGCAAATGAAGAAACTTTCTGATGTTCGAGATGCAATCCTGGAGAATTTCAAGAGATTCGACAGAGATCGACACTTGAATCAATTGTGCAGTGAGGATTTGGAAATTTTAAAGAATTGGCGTCTTGACTCTAATCTAACCGAACAATATGAGAATCATTTGACTATCCAGGGTTGGAACGACTTAAAGTATATGGCAATTGACTATCAGCGGACGTTCCAAAATGTGATTGAGACTCGTTACTCGAAGGAGAAATTTCGTTTTGGCTATTCAAATACTCAACGAACTGAAGCAAGTTACAAGGCTTTTGCTGAAGGACTTTTTGGTCCAAACGCTGACCAGTTCATCAATATTGGATCAGAAGGCAATGACAGCTACTTGCTAAGACCATATGAGTTTTGCCCGCAATGGACTAAACAGGAAGATGCGGCCAAGGATAAAAATTCGGAATACTATAAATTCCAGCAGAGCGATGTATTTAAGAAAATGCTTGAAGAAATTTCAATAAGACTCGGGTACAAGTACACGCTGAACGCAAAGCAAGTCGATAACATTTGGGACATGTGTCGCTATGATCAAGCTTGGTATCTCCAGGAGAGCTCTCCTTGGTGCGTGGCATTCACGCGAGAGCACGTCAACGTTCTTGAATACCTCGAGGATCTGGCATATTACTATAAAGGCGGTTATGGAAATGACATCAATGCAAATATTATGTCGTGTGCTGTCCAAGATATGCTGAAATTTTTGTCTACTGATCACTTGCCGAAAGCTTCCGCGTACTTCACACATGCATCGGCGATACAGCTTTTCCTAACAGCACTCAACTATGCAAACGATAACATAGGATTGCGAGCCGATAATTACAACCGCATGAAGAACCGAAAATTCCGTTCGAGTGTTCTTAGTCCCTTCGGATCAAACATAGCAGTGGTGAAATATGACTGTCCCGAAGACAGAAACCGATATAAAGTACAATTTTTCCTCAATGAACGACCGATTGATTTTGAGTGGTGCAACATAGGGCTTTGCGACCTTTCTGAAGTTCTCTCAAGATACCGTCATTTCATGGAGGGTGACTGCAAAAGCATGTTTTGCGGAGGAAATTCAGGAGCTTACTTAAAATTTTCGCCTTTGTTAATTTTAATGGCGGCCTTAATTAAACGTTTATTG
Protein: 470 (aa)
MNRFCVILLIVVNAIGVLSQEEYCYSNDNDKKQSKQYGTKTAYEISRGTDKKYFNVPKCEAVKFWLMSRHGTRNPSAKSIEQMKKLSDVRDAILENFKRFDRDRHLNQLCSEDLEILKNWRLDSNLTEQYENHLTIQGWNDLKYMAIDYQRTFQNVIETRYSKEKFRFGYSNTQRTEASYKAFAEGLFGPNADQFINIGSEGNDSYLLRPYEFCPQWTKQEDAAKDKNSEYYKFQQSDVFKKMLEEISIRLGYKYTLNAKQVDNIWDMCRYDQAWYLQESSPWCVAFTREHVNVLEYLEDLAYYYKGGYGNDINANIMSCAVQDMLKFLSTDHLPKASAYFTHASAIQLFLTALNYANDNIGLRADNYNRMKNRKFRSSVLSPFGSNIAVVKYDCPEDRNRYKVQFFLNERPIDFEWCNIGLCDLSEVLSRYRHFMEGDCKSMFCGGNSGAYLKFSPLLILMAALIKRLL
| Type | Start | End | Length |
| CDS |
29663 |
29834 |
172 |
| CDS |
29900 |
29991 |
92 |
| CDS |
30047 |
30963 |
917 |
| CDS |
31029 |
31257 |
229 |
| intron |
29835 |
29899 |
65 |
| intron |
29992 |
30046 |
55 |
| intron |
30964 |
31028 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001861930 |
multiple inositol polyphosphate phosphatase 1 [Culex quinquefasciatus] gb|EDS36269.1| multiple inositol polyphosphate phosphatase 1 [Culex quinquefasciatus] |
1e-120 |
| InterPro |
IPR000560 |
Histidine phosphatase superfamily, clade-2 |
|
| InterPro |
IPR016274 |
Histidine acid phosphatase, eukaryotic |
|
| Gene Ontology(MF) |
GO:0003993 |
acid phosphatase activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF00328.17 |
Histidine phosphatase superfamily (branch 2) |
4.7e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV15341-PA |
| T. castaneum |
TC006139 |
| N. vitripennis |
NV15344-PA |
| P. humanus |
PHUM429190-PA |
| A. gambiae |
AGAP006962 |
| P. vanderplanki |
Pv.03123 |
| A. mellifera |
GB11465-PA |
| A. aegypti |
AAEL015040 |
| M. musculus |
ENSMUSG00000024896 |
| H. sapiens |
ENSP00000437823 |
| H. sapiens |
ENSP00000361064 |
| H. melpomene |
HMEL014178-PA |
| D. plexippus |
DPOGS210868PA |
| C. quinquefasciatus |
CPIJ011248 |
| H. sapiens |
ENSP00000361062 |
| A. aegypti |
AAEL011510 |
| C. quinquefasciatus |
CPIJ011249 |
| A. aegypti |
AAEL014842 |
| B. mori |
BGIBMGA006993-TA |
| S. invicta |
SI2.2.0_07662 |
| D. melanogaster |
FBgn0026061 |
| N. vitripennis |
NV15342-PA |