MidgeBase gene description page [Pn.09187]
Outline
| Gene ID | Pn.09187 |
| Type | Protein coding gene |
| Scaffold | PnScaf9219 |
| Start | 7749 |
| End | 8735 |
| Direction | + |
Sequence
Transcript: 984 (bp)
ATGGAGGAAGAAACAAGCGCACCAATTAGTAAGATAACGCAGAAAGAACGCAAACGAATAGAAATACAGAAGAGGAAATTTCAATTGGAGCAAGATCGCATGATAAAACCGGGAGAGTGCAATAAGTACTTGAAAGCCATCATCAGTGATGAAATTCTAAAAGAAGTATCGGGGAGTATGGTGCTGGAGAAGCTGACTGAAATAAACATTCAAACACAAATATCGAAAGATGCGACGCCCAATACAATCACGTGGAAGAGACGAGTGAGTCAGAAGAAAATCACGGAAGATGGAAACATAATTGATTTTGCCGACACAGAAAAAGATGAACCGTATTTGATGATGATTCTCTCGGCCGATATATTTGTCAAAGCCTGCAAGGACAAAACACTCAAGAACATTGTTCTTGCCGCTCAAGAAATTTGCACCGACATTCCGATCTCGACAACCCTCATCGTCTTTGGCCTCAAAAGCTTCTGTAGAAAACACCGGAATGCTATAACAATGAATAATGTCGAATCAGCGCTTGCACAGCTTGAACTGATTGCGAATTGCAGCAATCGATTGCACGAAAACCCAGAAGATCTCGCATTTACAGTTCAACAAGTCAGCAAGGCAATAGCAGAGGAACCTTTCAAGAGCAAACAGGCACAGAAAATGGATCAGGAGCAGTTCTTCGTGACCGGTGACACGAAAGTCAATGCAAACGAAAATGATCCCGACTCACTCGCACGACTGTGGCACGCTCAACTCATGTGTCTGCCGAAAGTAACTTTCGATGTCGCTCAATCAATCACCAAAGATTACCGAATGCCGCGTTCGATGTTCGAAGCTTACAGCAAGGAGAAAAATAACAAGAACCAAATGCTTGCCGACATTCCCATCATCAGAACTGGCCCACTGTCGAAGTCGAGAAGAATTGGTCCCGAACTGAGTCGAAAGATTTCAACATTAATGACCTCGAAAAATCCCAACGATCTTCTC
Protein: 328 (aa)
MEEETSAPISKITQKERKRIEIQKRKFQLEQDRMIKPGECNKYLKAIISDEILKEVSGSMVLEKLTEINIQTQISKDATPNTITWKRRVSQKKITEDGNIIDFADTEKDEPYLMMILSADIFVKACKDKTLKNIVLAAQEICTDIPISTTLIVFGLKSFCRKHRNAITMNNVESALAQLELIANCSNRLHENPEDLAFTVQQVSKAIAEEPFKSKQAQKMDQEQFFVTGDTKVNANENDPDSLARLWHAQLMCLPKVTFDVAQSITKDYRMPRSMFEAYSKEKNNKNQMLADIPIIRTGPLSKSRRIGPELSRKISTLMTSKNPNDLL
| Type | Start | End | Length |
| CDS |
7749 |
8732 |
984 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR30188 |
hypothetical protein AND_00363 [Anopheles darlingi] |
6e-44 |
| InterPro |
IPR006166 |
ERCC4 domain |
|
| Gene Ontology(BP) |
GO:0006259 |
DNA metabolic process |
|
| Gene Ontology(MF) |
GO:0003677 |
DNA binding |
|
| Gene Ontology(MF) |
GO:0004518 |
nuclease activity |
|
| Pfam |
PF02732.10 |
ERCC4 domain |
1.2e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA013086-TA |
| N. vitripennis |
NV22304-PA |
| A. gambiae |
AGAP002302 |
| D. plexippus |
DPOGS207126PA |
| P. humanus |
PHUM359190-PA |
| C. quinquefasciatus |
CPIJ003895 |
| T. castaneum |
TC000427 |
| A. mellifera |
GB13010-PA |
| P. vanderplanki |
Pv.12747 |
| H. sapiens |
ENSP00000339897 |
| D. melanogaster |
FBgn0033549 |
| D. plexippus |
DPOGS207127PA |
| H. sapiens |
ENSP00000425567 |
| H. sapiens |
ENSP00000421700 |
| M. musculus |
ENSMUSG00000039055 |
| H. sapiens |
ENSP00000376952 |
| S. invicta |
SI2.2.0_06960 |
| A. aegypti |
AAEL009999 |