MidgeBase gene description page [Pn.09161]
Outline
| Gene ID | Pn.09161 |
| Type | Protein coding gene |
| Scaffold | PnScaf9164 |
| Start | 7618 |
| End | 8171 |
| Direction | - |
Sequence
Transcript: 366 (bp)
ATGGTGTCGCTGAAGATGAAGGGCTGCATGTCGCGCGGAACGATCATTCATGAGCTGATCCACGCGCTGGGCTACGACCACATGCACAGCCACTCGGACCGCGACAAGTTCGTGTCGATTGTGTGGTCGAACATCGACCGGAAGGCGTTCGGGAACTTCGAGAAGAACGACCCGCGCAAGTTCAGCAACTTCGGCACCGACTACGACTATTACTCGGTCATGCACTACAACCCGACCGCCTTCTCCAAGAACGGCCGCCGCACAATCGTGCCCAAGACCGAGAAGTTCAGGAACGTCATCGGCCAGCGTGTCGGCATGAGCGAGGGCGACGCCCAGCGCATCAACAACATGTACAAGTGCTTCAAG
Protein: 122 (aa)
MVSLKMKGCMSRGTIIHELIHALGYDHMHSHSDRDKFVSIVWSNIDRKAFGNFEKNDPRKFSNFGTDYDYYSVMHYNPTAFSKNGRRTIVPKTEKFRNVIGQRVGMSEGDAQRINNMYKCFK
| Type | Start | End | Length |
| CDS |
7621 |
7929 |
309 |
| CDS |
8115 |
8171 |
57 |
| intron |
7930 |
8114 |
185 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_306106 |
Anopheles gambiae str. PEST AGAP012881-PA [Anopheles gambiae str. PEST] gb|EAA02584.5| AGAP012881-PA [Anopheles gambiae str. PEST] |
6e-30 |
| InterPro |
IPR001506 |
Peptidase M12A, astacin |
|
| InterPro |
IPR024079 |
Metallopeptidase, catalytic domain |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004222 |
metalloendopeptidase activity |
|
| Pfam |
PF01400.19 |
Astacin (Peptidase family M12A) |
2.6e-43 |
| Pfam |
PF02130.12 |
Uncharacterized protein family UPF0054 |
0.016 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes