MidgeBase gene description page [Pn.09144]
Outline
| Gene ID | Pn.09144 |
| Type | Protein coding gene |
| Scaffold | PnScaf9151 |
| Start | 16696 |
| End | 31832 |
| Direction | + |
Sequence
Transcript: 6273 (bp)
ATGGAAGAGCGTCGGCCAGGAAGTGTGCGAAACAACTGTTTGCCCGAAAATCAGCAGCAGCAGCATCATCATCATCGACTTGAGCTTGATTTCCAAGGCGGGCGCTCGTGTCAAATTAACATCACCAAGGACAACGTAAAGTCTGTTTTCAGTTTTACTCTTCATGCGAAGAACCATTATTATGAAAAGGTTGAGAAGCAAGAAGTACAAATTTTGGAATCCTTAGTGCCTCAGAAATTGGAAAATGTTTTTGTGCGGCACCTAAAACCACAAATTATTTCGATTGTTTTAAGATTGCCGGAGAAACTGAAAAAAGCTGCACGAGATTTATTGTTTGATGTACGCCTCAAAGCAAAAGAAGAGAGCGACAGTGAATGGAAAGGTCTAAGTTATACGCAATATGAGGAGAATGACGGTGAAGTTGTATTGCCTCTCAATAAACTCGAGTATGCCAATACTGTTTATCAGTATAAGGTTCGCGTCAAATCAAAAACATCTCAAGACATTGAAGAAATGTGGTCACCTTATCTACTGAAAACGTTCAAAACAAAGCCGAAACTCCCCGAAATGACTGTGAAAGTTTGTAAAAATTGCTTCAATGTCATGGACAATGGAAATATATTTCTACATTGGATGGAAATACCTAAATTTTATCAAAACGGTGATAATTTCTCATACTTTGTTCGCATGATGAATGATGACGGAAAAATCATACACGAGGAGCATCTGGAAAAAGCAGTTCTCATGATTCCGAAAGATGTAGCCGCATCATCGCTCACCGTTCATATTTATAGCTCAAACGATGTGGGCTTGTCGCATCAGTATAGCGTTGCACATGTTCCAATCAGAGAAAAGGAGAATTTGCTAAATATTAAAAAAGAATTGATAGACGACATAGGCTACAAGTTGTCATGGAAACTCGAGGCAATTGATGCTATTGATGTTGCGAGTTATACGGTGCTCTTTTGCCGACAAAGAAATGAGCTTCAAAATCAATGTGACGGCTCGATAAGGTACCTCCAGTTATCGGCAAATGAATTCGAGTTCACATTCAACGCGTCGAATTCCTATCAATTTGGCATTGCTGCGAACAGATACGATGGCCGGCAAACAGGATTTCAATGGGCATTGTGCACAGCCTCTAAGCCAAATGAAATCGGAATAGTTCGCTCCATGTGGAGTCAATATGCATCGGAAAGCTCCATATCGCTCGAATGGAAGTTGAACTGTGCTGATAAAGATATCATTTACGGATATAATATTTCATATTGCATAGTCGCTGACTATGACAGCAGCTTGTGCATAGAGAGTCCGACATACAAAATTTTTTACGATAACCATAGCAGCAGGAAGGTTTATCAAATATTGTCTTTAAAGCCCTACAAGCAGTACAACATTTCCATTGCTTTGATAAGTTTGAGTGAACGCAGTGGAGCATTTTCTGCGCCAATCACCATAAGAACACTAGAAGCTTCTCCGACTGCGCCGAGGAATTTGCAGGCTCTCAACATAAGCGATAATTCAATTTCGCTTTTATGGCAACGTCCTCGCGAAATCAATGGACCGTCTTTAACTTATCAGCTTTGGTGCAACGATAAAATGATACAAATTGATAACAATCAGACGTTGAACGAAAGTTATCAATTCACTATTGAGGGCTTGAAGGCGTATTCAAACTACACGATAACAGTCGTGGCGTGTACTCGCAACTGCTCACGTCCAAGCGGAAGTTTGCATTTACGAACAAAAATCGGAAGACCGGGAAAAATGAATCAGATTCTTTTGAAGTCTTTCGATAACGGAACAATTTATTTAAAATGGGAAGAACCGAGTTTCTTAGGGGGGCTATTAGACTATTATTTATTGAACATTACGTACGACAACTACGACTCAAAATTCTTTAGGATTAATGGAAGGAGAAAAGATTGTGTTATTAGCGCGTTTACCTGTGATAAATATGTATATTTCTCAATGCAAAGTGTGAACATCGATTTGTCCGTAGAAAATGATGGTGACTTGAATGAAATATTCACTCCATCGAGCGATACTAACGATTGCATATCGACTGTTCACGAGCAGCATAAAGGATTTAATCATTACTATGGTAGCTTATCCGAGCCTGCCAGTTATATGTGTCAGTTCAATTATGGCAGCATCATAAACATAATTAGTCGTTCGTCTGTCGCCATGATTATTACTGTTGTTTTCTTGATGTCAGTTCTAGCGTTAATAGCGTATATTTTATTGAAGATTTATCACAAAATTCAAGAAATGAAAGATATTCACATCGTATGGCCACAAGGTATTGAATCGAGTTCACTTGAGAAGCCAGAGAGATATAGCCCGAGCAGCATTTATAACAATAATGACTGTGAACCTCTATCAAAGCTGGATTTGATTGTTAATCATTCAATGAGTGGAATAAACAACAACAATAAAATAATTTGTAATTTAAGTGATATAAAGGAGGAGAGCTGTAGAGATTTAGAATTCTATAATAGGGCCGTAGAGTTCGAGCAAAATTATTGTGAAGAAATTAAAGAAGATTCTCGACAGCCGATTGTTAAAAAAAGCAGAACATGCGAAGTGATATTCAATGGGTCGACTGGAGATTACAAAAGATCTCAGTCAGTTCCATCCTCTCCGCACAATGATTCAGACCACAGTGTGGATCAACGTACTGGCTATATGAAAATGTATTCACCTATTCGATCTAATAATAGCATCAACAGCGTTGGTGCTGCAGGTTATTGTGATATAACGACAAGACGAAAAGTAAACTGGATAGGCTTAATTTCTTCGATATCGTTTCTACTCCTTGTGAGTAGTCTCATTCAGTCGGCAGAGTGCATAAAAGGATGGACTGACCCAAAAGGAACCATTGTTATCGAGAGAGGGACAAGGCTGAGCATAAAGTGCGCAGTAGAAAGCGAGGAACTAACAAACAAAAAGATGAGCACGCTGCTCGGATTTCACAATAATACCGCAAATGAAGACATCGACCGACGTTACATCAATATTATTAACGATACGGCAATCGAGCTGGTAATTCCGAAAGCCACAGAGCAAGATTCCATGCTCGTGTGCAAGTACAATGGCTCAAAAGGAATTATGTACAATGATATCAAAGTTGGCCATAAGCCGGATATTATTAGGGATTTGGAATGCACATCGTTTGACTGGGTAAATCTCACATGCACCTTCACAAAGCCATACAACCCGGTATTTGTCCAGTATGAACTGAAATACAACACTCCCAGTTCTGGTGTTATGTACAACTGTCAAGACGAGAAAAAGGCTCCGGGCAAATTTGAGTGCGTTTTCAGTGACTCATACCGACGCTTTCACCCACATTTTACATTCTACCTGTACTCCAACAATCTCTTCGGATCTCGCAACCAAACCTTTGACTTTGATAATTTTGCAAATATCATTCCCTCGAGAGTGGACGATTTGAGGTTGGTGCCGGAAACATCAAAGTCTGATAGCATTACAATAGCATGGTACTTGCCTTCTAAGCTCACTGTTCTCATGAAGCAGTCTTTTTCGTTTGACTTTGAAATTTCCATTAATTCCTCTCTCGACTGCGGGGCCGGCGAAAATAAGATTTTGTTGAGAAATTTTTCCGCAATACTCGGCACAACGAGTCGCAAGAACGAAGACGCCAGCTATCAGTACACAATTCCGGTTGGTTTTGCCAACAAGTGGTACGATATCGGTGTGAGAATGAAGGTTTCGAAAGCCGAAAATAAGAGCAAAATGTGGAGTGATTTTGCGAAAATTCAAGCGTTCACATCAGCCCGTGCTCCCGATGATCCACCCAAAATTGATGTCGGCTCATTCAACATTCTGCCCAACGGCGACGTGTACATTTACTGGAAACATTTGTCAACGTGCGAGCAAAACGGAAACGAATTCGGATATTCCATTAAGTCAAGCAACAGGCAGGAGGCACCGTCGGAGCACAATCAAATATATGCTGTTTATCGTCGAGATTTGAATAATCTCTCGAAAGACACCGTCATCACAATCAGAAGCAAGAACTCTGTCGGTGAGTCGGCCAAAGCAAGCACCTTAATCATACCGGGAAAGAGTCGACGCCTCAACGGACCAACCAAAATAAACAAAAAGTCTGTCAATGGAAAGTACATTCTGTCGTGGTCCCCGCCGGAGAAGAAGAACGAGGAGGAAATCACCTCGTACACTGTCTTCTGGTGCAACTCGAAAACGGAGTTGATTAATCAATGCGAAAATTCAATCGAATTCGTTCGACGATCGCCTCACGAGACGACCTTTGAGTACGACTCCGACCAGCCAGTCAATTTTGCCATCTCGGCAAACAGCGAGACATCCACGTCAGGCATGATGTGGGCAAAATGCACAACGGCCAACAGCAATGAAATTGGAAAAATTCGCACTGCAAGAATTTCTCGTTTGTCATCGAAGGAGATTGAAGTTGAATGGAATTTGGACTGCACCGACTCTGGCATTGTCGCCGGCTATCAAATTGAGTACTGCCCAATTAGTAAGCCCAAAACACTCGAGTGCATTGCGGGCTCGGAGAATAGAACCAATATCACGACGCAGGTCGATCACACGAAGTTCACTTTGACGGGACTAAAGCCATACACAACTTACAAAATAATTATTCGAATGTTCTCGAATTCCACCATGGGACCGCCGAGTGAACCTCTTGCGAATACCACGCTCGAAGACGCTCCATCTGAGGTGCGCAATTTGCTCGCTCGTAACGTAGGAAATACGACAGTCGATCTCTATTGGGAACCGCCCGAGCATCCGAACGGAATCATCGGGTCGTACGAAATTTGGAAGAATGGTGAGCGGTATTATCAGAAGGAAAATCCAAAGGTTCCATACGACAACGAGCACACGATTGAAACGATTCAAAACTATACGCTGACGGGATTGGATCCCTACACGGACTACGAAATTGTTGTGCGTGCTTGCACAAACAAATGCTCAAACGGCCTAAACACCCACTTTAAGACAACGATCGGAGCACCGGGGCCATTTGAAAAGCAACCGATAAACAATTTTAGCGGAAAGTTTGCCAGCGGCATCATAAGTTGGTCTCAGCCGAAGGTGAAGGGCGGGCATTTGGATTTTTATGAGCTGAGGACGACTTTTAGCGGCAGTGGCGATGCCTTGGAGGAGAACATCGTGAAGCTGAATGCGAAGGAATGCTTCATGGAAAATTTATGCATGAACAATCTGACTGGAACCTTTCATTTTTCTGTGCGAGCGGTGAACTTCGTTTTGACACCACACGCGAAAAATTTGAGCTTCAGGATTCAGGCGCACAACTCGAGAGATCACATGAAGTGCGCCAATGACGAGGAGTTGCTAGAGTCAATCAGCAAGGCGTCAGAGGTCGATCAATACGGTTACTATCTTTACGGGCCATGGTCGGATGCGTCGAGTCATACATGCCACTTTTCGAATTTCAACTCCAAGCAATACATCATCATTATGATTCTTATGGTCGCCTCGCTTGTGTTCGTCGTCATGGTGTTCTACCTTTATCGACGAATTAAAGACATGAAGGATATCTTGGTACAGATGCCGCCCGGCCTTGAGGACTTGCAATCGGAGAAAGCCAAAAAAGGCAAAGATTTAAATACGGATAAGGTCGGAAAACCCGACCTGCTTCACAACATCGGCAGTCCATACATTATGAATGAGGATGAGCATGGCCGCTTACTGAAAAGATCGATGAATGGCAGCATAAATGGAGCAGATTGCAGCAGTAGTATGCATAGTGAAAGCAGCCGCAGTGAAATAGAACCGGCAGACATTGATGACATTGAATACAACGATTTTGGCCAGCAAAATAACACGAGCGACGGAGAAGCAGATGCCGCAATTATCAGTAGGAGACCACAGAGCTTTATCATGAACTCCTCAGTTCCGAAGGAAATTGCACCGATTCTCATTTCACCCGAATCGATATCAGCATCGACGCCCGTTGCTGAAAAGTTCAATAATCCAAATGCTTTTATGCATCCGAAAACACCGCCGAATCACAGTGGGTATATTGCGCCTCCTGTGCTACACTCGACGCCAGTTCCTCAAATCAATAGCAACGGCTACGTGACGCACTCAATGTTGAATCCGATGCAGTCTAGCGGATACACTCAGCTCAACGCGCTTGGAAAGCCAATACTGAATAATGACAGAAACTTCATTGACAAATTAAATTTGAAAACACCGATTGTAGCGACTACCGATCAGGAGGGCATTTCAGGTATTACT
Protein: 2091 (aa)
MEERRPGSVRNNCLPENQQQQHHHHRLELDFQGGRSCQINITKDNVKSVFSFTLHAKNHYYEKVEKQEVQILESLVPQKLENVFVRHLKPQIISIVLRLPEKLKKAARDLLFDVRLKAKEESDSEWKGLSYTQYEENDGEVVLPLNKLEYANTVYQYKVRVKSKTSQDIEEMWSPYLLKTFKTKPKLPEMTVKVCKNCFNVMDNGNIFLHWMEIPKFYQNGDNFSYFVRMMNDDGKIIHEEHLEKAVLMIPKDVAASSLTVHIYSSNDVGLSHQYSVAHVPIREKENLLNIKKELIDDIGYKLSWKLEAIDAIDVASYTVLFCRQRNELQNQCDGSIRYLQLSANEFEFTFNASNSYQFGIAANRYDGRQTGFQWALCTASKPNEIGIVRSMWSQYASESSISLEWKLNCADKDIIYGYNISYCIVADYDSSLCIESPTYKIFYDNHSSRKVYQILSLKPYKQYNISIALISLSERSGAFSAPITIRTLEASPTAPRNLQALNISDNSISLLWQRPREINGPSLTYQLWCNDKMIQIDNNQTLNESYQFTIEGLKAYSNYTITVVACTRNCSRPSGSLHLRTKIGRPGKMNQILLKSFDNGTIYLKWEEPSFLGGLLDYYLLNITYDNYDSKFFRINGRRKDCVISAFTCDKYVYFSMQSVNIDLSVENDGDLNEIFTPSSDTNDCISTVHEQHKGFNHYYGSLSEPASYMCQFNYGSIINIISRSSVAMIITVVFLMSVLALIAYILLKIYHKIQEMKDIHIVWPQGIESSSLEKPERYSPSSIYNNNDCEPLSKLDLIVNHSMSGINNNNKIICNLSDIKEESCRDLEFYNRAVEFEQNYCEEIKEDSRQPIVKKSRTCEVIFNGSTGDYKRSQSVPSSPHNDSDHSVDQRTGYMKMYSPIRSNNSINSVGAAGYCDITTRRKVNWIGLISSISFLLLVSSLIQSAECIKGWTDPKGTIVIERGTRLSIKCAVESEELTNKKMSTLLGFHNNTANEDIDRRYINIINDTAIELVIPKATEQDSMLVCKYNGSKGIMYNDIKVGHKPDIIRDLECTSFDWVNLTCTFTKPYNPVFVQYELKYNTPSSGVMYNCQDEKKAPGKFECVFSDSYRRFHPHFTFYLYSNNLFGSRNQTFDFDNFANIIPSRVDDLRLVPETSKSDSITIAWYLPSKLTVLMKQSFSFDFEISINSSLDCGAGENKILLRNFSAILGTTSRKNEDASYQYTIPVGFANKWYDIGVRMKVSKAENKSKMWSDFAKIQAFTSARAPDDPPKIDVGSFNILPNGDVYIYWKHLSTCEQNGNEFGYSIKSSNRQEAPSEHNQIYAVYRRDLNNLSKDTVITIRSKNSVGESAKASTLIIPGKSRRLNGPTKINKKSVNGKYILSWSPPEKKNEEEITSYTVFWCNSKTELINQCENSIEFVRRSPHETTFEYDSDQPVNFAISANSETSTSGMMWAKCTTANSNEIGKIRTARISRLSSKEIEVEWNLDCTDSGIVAGYQIEYCPISKPKTLECIAGSENRTNITTQVDHTKFTLTGLKPYTTYKIIIRMFSNSTMGPPSEPLANTTLEDAPSEVRNLLARNVGNTTVDLYWEPPEHPNGIIGSYEIWKNGERYYQKENPKVPYDNEHTIETIQNYTLTGLDPYTDYEIVVRACTNKCSNGLNTHFKTTIGAPGPFEKQPINNFSGKFASGIISWSQPKVKGGHLDFYELRTTFSGSGDALEENIVKLNAKECFMENLCMNNLTGTFHFSVRAVNFVLTPHAKNLSFRIQAHNSRDHMKCANDEELLESISKASEVDQYGYYLYGPWSDASSHTCHFSNFNSKQYIIIMILMVASLVFVVMVFYLYRRIKDMKDILVQMPPGLEDLQSEKAKKGKDLNTDKVGKPDLLHNIGSPYIMNEDEHGRLLKRSMNGSINGADCSSSMHSESSRSEIEPADIDDIEYNDFGQQNNTSDGEADAAIISRRPQSFIMNSSVPKEIAPILISPESISASTPVAEKFNNPNAFMHPKTPPNHSGYIAPPVLHSTPVPQINSNGYVTHSMLNPMQSSGYTQLNALGKPILNNDRNFIDKLNLKTPIVATTDQEGISGIT
| Type | Start | End | Length |
| CDS |
16696 |
16772 |
77 |
| CDS |
24147 |
25222 |
1076 |
| CDS |
25284 |
25604 |
321 |
| CDS |
25678 |
26962 |
1285 |
| CDS |
27864 |
29821 |
1958 |
| CDS |
29968 |
31154 |
1187 |
| CDS |
31359 |
31586 |
228 |
| CDS |
31689 |
31829 |
141 |
| intron |
16773 |
24146 |
7374 |
| intron |
25223 |
25283 |
61 |
| intron |
25605 |
25677 |
73 |
| intron |
26963 |
27863 |
901 |
| intron |
29822 |
29967 |
146 |
| intron |
31155 |
31358 |
204 |
| intron |
31587 |
31688 |
102 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001867486 |
tyrosine phosphatase [Culex quinquefasciatus] gb|EDS45159.1| tyrosine phosphatase [Culex quinquefasciatus] |
1e-132 |
| InterPro |
IPR013783 |
Immunoglobulin-like fold |
|
| InterPro |
IPR003961 |
Fibronectin, type III |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF09240.5 |
Interleukin-6 receptor alpha chain, binding |
4e-06 |
| Pfam |
PF01108.12 |
Tissue factor |
0.02 |
| Pfam |
PF00041.16 |
Fibronectin type III domain |
1.1e-49 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ017416 |
| P. humanus |
PHUM374950-PA |
| D. melanogaster |
FBgn0043903 |
| A. aegypti |
AAEL012471 |
| P. vanderplanki |
Pv.05434 |
| D. plexippus |
DPOGS200349PA |
| B. mori |
BGIBMGA005642-TA |
| S. invicta |
SI2.2.0_10874 |
| A. mellifera |
GB12159-PA |
| T. castaneum |
TC001874 |
| H. melpomene |
HMEL000037-PA |
| A. gambiae |
AGAP010083 |
| N. vitripennis |
NV22778-PA |