MidgeBase gene description page [Pn.09050]
Outline
| Gene ID | Pn.09050 |
| Type | Protein coding gene |
| Scaffold | PnScaf9029 |
| Start | 767 |
| End | 3096 |
| Direction | + |
Sequence
Transcript: 2052 (bp)
ATGATGCTGAAATTATCTTCAAGATTAGTTTTCAACAAGACTTTGCCAAAGTCGTGGAATTTTAATCAAAATCTTCTCAAGGCCGTCCAAAGTGAATTTAGCAAACCAAGAAACTTTCAAGTGCATGCCGCAAGGCTTAATCAAATTCACGATTATGAGTTCTTCCATGAGGAGTTCAAGAATCTCAAACCCAAAACCGTGATTGAACTTTTCGATGAAGCCGTTCAAGATTTTGGCAATCGAACGGCGTTGATGCACAAGAAGGAGGGCAGCAATGAATGGACCTCGATCACTTACGGCGATTATAAAAAGAAAGCCGAAAAAGTTGCAAAGGCCTTCATAAAACTCGGTTTGGAAGAGCGTGGCAGAGTTGCAGTGCTTGCCTTCAACAGTCCCGAGTGGTTTATCGCCGCAATGGGAGTTGTTCATGCCGGAGGCCAAATTACCGGAATTTATACAACAAACTCCTCCGATGCTTGCCATTACGTACTCGAGAACTCGAGTGCCAATATCGTAGTCGTCGACACGGACGAGCAGTTAGGGAAAATTCTGAGAATTAAGGATAAGCTGCCAAAGTTGAGGGCTATTGTCAAGACACTTTCACCCTTCGACGCGGAAGGTGTTCTCAAGTGGAGCGACCTCGAGGATATGAACACCGACGATGTTGAGGCGGAGTATAGACGGCGGATAAGTAACGTTAAACCCAGTGATTATTGCTCCATTTCGTACACGTCGGGCACCACAGGCAATCCGAAGGGAGTTATACTCACGCACGACAATCTGGTTTGGGAGATTGATGTCCTCTGTAGGATATTCCAAATTTTTGAGAAGGGTAATGAGACGGGCCTTTCCTATCTTCCGCTCGCCCACATGACTGGCCAGCTGGGCGAGTTGATGATGGGCATGTGGAGCGGGTCAACGGTATACTTTGCCGATAAGGATGCCCTAAAAGGCACTTTGGTTGACACGCTGCGTGCCGCTCGACCAACCTTCTTCATATCGGTTCCGCGCGTTTACGAAAAGTTTCAGGAGCGTCTGATGCAGGCGAAAGCCGAGTCGAAGGGATTAAAGAACTTTCTGCTGTCGTGGGCTCAACGAGTGACACTCGAGCATCACACGAAACGACTCAATGGCGGAATCAACGACAAGCACTTTTCGCTGCAATATGAGCTCGCAAAGCGGTTGATTCTGTCGAAAGTGAAGGCGAATCTGGGATTTGATAGATGCAAGTATTTTGGCACCGGAAGTGCGCCAATAAGCTACGACACTACGGAGTTCTTTATGAGCTTGGACATTCCGCTGCAGGAGGTTTATGGGCTGACGGAGACGAGCGGCATTAGCTTCGTGCGAGCTAGATGGCACAATAAACTGACGACGCTCGGCAAAGGATTGCCGGGGTTAGAGACGAAAATTGCAAATCCCGATGCGGAGGGTATCGGTGAGATTTGCATGCGTGGCCGAAATGTCTTTGTGGGCTACTTAAATGATCTTGAAAAGACTCGAGAGACGATTGATGAAGACGGATGGTTTCACTCGGGCGATGTCGGGGTTATGGATGGCGAGGGATTTTTGACCATAAAAGGTAGAATTAAGGAGCTTATAGTCACTGCTGGCGGTGAAAATGTTCCCTACCTGCACGTCGAGAGTCTCGTCAAAATAGAATGCGCTGCAATTGCCAACACTTTTTTGGTCGGCGACAAGCGAAAGTTCCTCTCAATGCTGCTGACTTTGAGAACAGAAATCGACAGCAGTGGAGCACCTTCGGATGAGTTAGCACCGGAAACTCTTAGGCTGATAAAAGAGCTTGAACTGAAGTACACAAAATTGAGTGAAATTCTCAGCGCAGGGCCAGATTCCAAAGTTATTGCAGCGCTGCAGGCGGCTGTAGATCGAGCGAACCAACATGCAATTTCGAATGCACAAAAAGTTCAGAAATTCGCGATTCTTCCCAATGACTTTAGCATTCAAACCGGAGAATTAAATGCTGCAATGAAACTGAAAAGAAATGTCGTGTTGGACAAATACAAGACCATTATTGACAATTTTTATGCT
Protein: 684 (aa)
MMLKLSSRLVFNKTLPKSWNFNQNLLKAVQSEFSKPRNFQVHAARLNQIHDYEFFHEEFKNLKPKTVIELFDEAVQDFGNRTALMHKKEGSNEWTSITYGDYKKKAEKVAKAFIKLGLEERGRVAVLAFNSPEWFIAAMGVVHAGGQITGIYTTNSSDACHYVLENSSANIVVVDTDEQLGKILRIKDKLPKLRAIVKTLSPFDAEGVLKWSDLEDMNTDDVEAEYRRRISNVKPSDYCSISYTSGTTGNPKGVILTHDNLVWEIDVLCRIFQIFEKGNETGLSYLPLAHMTGQLGELMMGMWSGSTVYFADKDALKGTLVDTLRAARPTFFISVPRVYEKFQERLMQAKAESKGLKNFLLSWAQRVTLEHHTKRLNGGINDKHFSLQYELAKRLILSKVKANLGFDRCKYFGTGSAPISYDTTEFFMSLDIPLQEVYGLTETSGISFVRARWHNKLTTLGKGLPGLETKIANPDAEGIGEICMRGRNVFVGYLNDLEKTRETIDEDGWFHSGDVGVMDGEGFLTIKGRIKELIVTAGGENVPYLHVESLVKIECAAIANTFLVGDKRKFLSMLLTLRTEIDSSGAPSDELAPETLRLIKELELKYTKLSEILSAGPDSKVIAALQAAVDRANQHAISNAQKVQKFAILPNDFSIQTGELNAAMKLKRNVVLDKYKTIIDNFYA
| Type | Start | End | Length |
| CDS |
767 |
1200 |
434 |
| CDS |
1253 |
1563 |
311 |
| CDS |
1787 |
3093 |
1307 |
| intron |
1201 |
1252 |
52 |
| intron |
1564 |
1786 |
223 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_314697 |
AGAP008596-PA [Anopheles gambiae str. PEST] gb|EAA10184.3| AGAP008596-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR020845 |
AMP-binding, conserved site |
|
| InterPro |
IPR000873 |
AMP-dependent synthetase/ligase |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00501.23 |
AMP-binding enzyme |
4.3e-98 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.11941 |
| Pn.16835 |
| Pn.15890 |
| Pn.02182 |
| Pn.09192 |
| Pn.09222 |
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000466336 |
| P. vanderplanki |
Pv.07480 |
| D. melanogaster |
FBgn0028519 |
| C. quinquefasciatus |
CPIJ801793 |
| H. melpomene |
HMEL013304-PA |
| H. sapiens |
ENSP00000464938 |
| P. humanus |
PHUM039170-PA |
| P. vanderplanki |
Pv.10129 |
| S. invicta |
SI2.2.0_12902 |
| D. plexippus |
DPOGS203804PA |
| H. sapiens |
ENSP00000453451 |
| M. musculus |
ENSMUSG00000024207 |
| P. vanderplanki |
Pv.16154 |
| M. musculus |
ENSMUSG00000024209 |
| A. mellifera |
GB12567-PA |
| P. vanderplanki |
Pv.10531 |
| A. gambiae |
AGAP008596 |
| H. sapiens |
ENSP00000465589 |
| A. aegypti |
AAEL005740 |
| N. vitripennis |
NV14968-PA |
| H. sapiens |
ENSP00000258873 |
| D. melanogaster |
FBgn0027348 |
| B. mori |
BGIBMGA003709-TA |
| H. sapiens |
ENSP00000439955 |
| H. sapiens |
ENSP00000252669 |
| H. sapiens |
ENSP00000467755 |
| P. vanderplanki |
Pv.11262 |
| T. castaneum |
TC004625 |