MidgeBase gene description page [Pn.08910]
Outline
| Gene ID | Pn.08910 |
| Type | Protein coding gene |
| Scaffold | PnScaf8764 |
| Start | 6997 |
| End | 11902 |
| Direction | - |
Sequence
Transcript: 4764 (bp)
ATGTGGAACATCACCGTGCGCCGCGGACGCAAAATTCAGTTCGAGATCCTCGACATCAACATCCGCAACGCCTCCGACGGCTGCAGCAACTTCATCTCCATCAAGAACGGCCACGACGACTCGGCGCCTTATCTCGGCAGCGGCCAGTTCTGCACGAAAATGGAAATCCCGCAGACGACCGGCAATCGAGCCTTTGTCTCGTACAAGGTCAACACGCCCTTCTTCAACTCCTTCCGGCTGCGCTACGCGGAGGTGCAGCACGAGTGCGGCGGACAAATCACGCTCTCGAGCGCCTACACCGCTTCCACCATCAGCTCACCCAACTATCCCAACATCCCGCCGCCGCACGTCGAGTGCACGTGGATCATCATTGCGCCGGTGGGCCGCGAGATCCGCGTCGACTTCCTCGAGCGCTTCGACCTCACGCGCGGCGAGTTTTGCGACAAGGAGTTTGTGGAGCTGCGCGAGGGATCGACGTCGGCAGCTAGCTTGATCGGCACCTACTGCGGCAGCACAAAGCCACAGACGCAATACACAAAGTCGAACGTGCTGCGCGTGCGCTTCGTCACGGACGTCCTCGAGCCGAAGAACGGCTTCAAAGCGAACGTCTCGATCGGCGTGTGTGGCGGCACGGTGCGAACCACGGGCGTCGGTTATGTGTCGTCACCGAAGTACCCGGGCATCGGCGCATATCCGAGCAACGTGACGTGCGACTATCGCATCGTCGGACCGCCAAACACGATCTTCACCGTCGAAATTATCGACATCGACTTGCCGGGTCGGGAGGATGAGAGCCGCGACTACGAGAGCAGTGAGATGTCGAACTCGCCGTCGCATGGCTGCGACACGCAGAAGGACCATTTCGTGCTCTACTCGGTGATGCCAGACGTCGGCACGAACGAAACGCTCCTCGACACCGGAACATTCTGCGGCTCGCACGCCCCCAAAAGAGCCATCACCAGCGACTCGAACGAAATTCTCGTGCGGTTCAGGACGTTCGCGCGCACCAACAAGCTCTTCAAGGGCTTCCGCCTCTTCTACAATGCCTCGCGGCAGAGCTGCGGCGGCGAACTCAACGCCGACTCCGGCATCATCACGAGCATCGCTTATCCGTCGCGCACGCTCAACCGCGCCTTCTGCGAGTGGCGCATCACGGTCAGGAAGGGCCGTCGCGTCAAACTCGAGTTCCTCGACCTCGACTTTGTGCCGCCCGACGTGCGCAACATGCAGCGCCTCATCATCTACAGCGACTTTTCCTACGCGAGCCGCATGATGTTCATCACGAGCAACAACAACCCGGGCGTCGTTTACTCGTCCGACAACAAGCTCATGATCACGGCGTGGATCCGTGCGCCGTCGCAGAACCGCGGCTTCAAGATCAGGTACTCGAGCGAGGAGCCGTCGCTGTGCGAGGGCGACTTGAACGCCGACGAGGGCTACATTTATCCGCCGAACATCGAGAACGCGACGAGCTACTCGTGCACGTACGAGAGGCAGAACAGGCCGATTGTTGGCGACGCACTCGGCAAGGGCACCGTCGCCTTTTACCTGAGCAACCTCGACGTCGGTCGGCGAGTGGTGAACTGCCGGTTTGCCGCCACAAACTTGGCCTTCTCGCGCGCCTCCGCGATGGTCGAGAGCGAGAAATATCTGGCTCGGATTTGCGGGAATGCCTCGGAAACTGCGACCGTCCTCTCGCCCTTCCCCGACGTCCGCTTCGAGGTCAAGCAGAGTCCGTTCTTCGGCAAGGTGAACTTCTCGCTACACTACAAAGTGCACAACTGCGGAGGCCTCATCAAGGGCGGCCCATCGGCCATTAACATCACGAACCCGCCGCCGAACACGGCGGACTACAAGAAACTCGACTGCGCCTACCACATCAAGTACGAGGAGGGCTTCGCAGTGGCTCTGAAAATCCAGCGCCTCCGACTGAAGCTCTCGTGCGAGCAGGAGCACATCACCATCTACAACGGCCCGAACGCCATGAGCCCCGTGCTGGCCAGAATATGCGGCGACGACTTCGACCGCACGCCCCTCATCTCGCAGAAGGAGACCGTCTACATCGAGTACCACACGGAGAATTTCAACGGCGAGAGCCGCAACTCGGAGTTCAGCATCAACGTCGACTCGTCGTCGTTCGGCTGCGGTGGCATCCTTAACCACCTGATCAGGAGGTTCAGCACGCCGCTCTACGACAAACCCTACCCGCCCAACACCGAGTGCATGTGGGAAATTCGCGCCGACTCGGGCTACCAGGTCGGCCTCTACTTCACCGAGCGATTCTTCATCGAGGCCTCCGACAACTGCACCAAGGACTTCCTCGAGTTCTACGACTTTGTCGACAACGAGTGGATCTTCATGAAGCGCGTGTGCGGCCGAGACACGCCGCAGCCAGTCAACTCGACGTCTACGCGACTGCGCGTTCTCTTCCACTCGGACGGCGCCCTCAACGGCGACGGCTTTGTTGCGCAGTGGGACCAAAACTGCGGCGGCGTCATCGCCGTCGACACGAAGAAGCGAGTGCTCACGAGCCCGCGCTATCCGCTGGCGTACGAGGCCAATCTCAGGTGCAACTACACGTTCGTGACGTCGAACGCGGAGGACTTTGTGAACATCAAGTTCCTGGACTTCAACCTCGAGGCGGTCAACGGAAAGTGCATTTACGACAACGTGACCGTCTACAAGTGGCTCGAGTACATGTCGCCGCAGGAGATGAGCAAGGTGGGCGTCTTCTGTGGCACGAAAAACCCCGGCAATTTCCGGTACAAGAACAAGATCACGATCATCTTTGTCAGCGACCAGTGGGTGGAGCGCAAGGGCTTCCAGCTCGAGTACAGCACAGACAGCTGCGGAGGCGTCGTCACGTCGCCGACGACCATCGCCTCGGTGCCGATCGTGCGGTCGACCAACAGCGAAACCTACGAGTACCTCGGAGCGATGAGCTGCGTGTGGAACATCACGGCGCCGCCGAACCACAAGATCGTGCTGAAGTTCGAGAAAATCGCGCTCGACTTCAGCGAGTACTGCAGCTACGACTTCGTGGAGATTTTCAGCGGCGCGCTCGATGACGAGAAGAACCGGCTGGTGAAGCTGTGCAACAACCTCACGATCCCGCCGATCTCCGTCTTGGACAACCAGGCGGTCGTGAAGATGAGGACCGAGCAGTCCAAGGACTACCTCGGCTTCAGCGCAGTCGTTTACTTCCAGGAGAAGTGCGACCAGGCATTCACGCTCACGCTCAGCAATCCCTCGGTGGTGATCGACATTTCGCACCAGCAGACCGCCGCCAACCTCGAGTGCACCTACAAAATCAGCGGCGATCCTCTCAGCACGTTGCGTGTCCGCTTTGACGAGATGCACCTCTCGATCTGCGATCCCGACCAGCGCAAGGACAACTGCAGCTGCGACTATCTCGAGTTCTTCGACGGCAACGGGCCGTTCAGCCGTCCCATCGGTCGGTACTGCGGCCACGACGCGCCCATCGACATCATCTCGACCACCTCGAGCCTGTACATTCGATTCGCGACCGACTCGATTCGCAGCAGCAATGGCTTCAAGCTGACGATCACGATGCAGGAGTCGCCGTGCGGACCCGTGCCCTACTTCAACTTCACCAATCCCGAGCAGGCCGTGGTTCTCACGTCGCCGCGCGTATCGGCCAGCACTAGGCGCTACCCGCCCAACATCCGCTGCCAATGGACCATCGAAGTTCCCGAACGCCAGAACATCGAGATCATCTTCGCTCTGTTCGAGCTCGAGGACTCGGAGGGCTGCCGGAACGACAGCCTCAGGATCGAGGACGACATGGTGAAGGACTACGTGCTCGAGGGTCTCGGACAGGAGACGGTCTACCGCGGCCACAGCACGCACACTTTCCAGCCGAGCTTCTACATGGGCATCACGGGGCCGACGGCGCCGCACGTCTACTGCGGCTCCGTCCTGCCGCACGACTACTTCTCGACGACCAACAAAATCCGCATCTACTTCGAGACAAACTCGGAGCTCGAGTTCGGGGGCTTCGACCTCACCGTGCGGCAGGTGAGCTCGTGCAACCGCAACTACACGGCGCTCCAGGGACGACTGATGGCGGACGTGAGCGTGAACGGTTGCCACACGACCATCACCGTGCCGGAGAACTACACGATTTCGCTGTACTTTGCGCGATTCTACTTCTACGCCAACGACTGCGAGAAGTCCTTCATGAAGATCTACGACGGCACGTTCGAGACGGGAGCGCTGCTGCGAACGCTCTGCGGGTACTCGACGCCCGATCCGGTCTTCTCGGCGGGCAATCGGCTGTCGATTCGAACCAAGTACGAGGACGACTCGACGTTTTTTACGCGCGGCAACTACGACATCATGTATGTGGCGTCCGAGAGGAGCAAAGGTCCGGGCTGTGGCGGCGAAATTTTCAATTACGGAGGGCTTTTCACGAGTCCTCAGTATCCGAGCGTCAATCGCACAAATTACGACTGCACGTGGACGGTGCGGGTGCCCTCGAACCTCGTCGTGGCTCTGAAGTTCCAAATCTTCGACATGGGCTCAAAGCTCTCCTGCGGCAAGGACTACGTGGAGTTTTTGGAGGAAAACGAAGCAAACGAATTTAGGTCGATCAAGAGCTACTGCGGCGACGACGAGCCGGCGATGTATGTGAGCAGTAGAAGCCAAATAAAGATCCACTACGTGCAGACCGTGCACTTTGCTGGAACTGGCTGGATGCTCCACTTCATGGGCATTCACGAGGGTTCAACGCCTCTGGACTGG
Protein: 1588 (aa)
MWNITVRRGRKIQFEILDINIRNASDGCSNFISIKNGHDDSAPYLGSGQFCTKMEIPQTTGNRAFVSYKVNTPFFNSFRLRYAEVQHECGGQITLSSAYTASTISSPNYPNIPPPHVECTWIIIAPVGREIRVDFLERFDLTRGEFCDKEFVELREGSTSAASLIGTYCGSTKPQTQYTKSNVLRVRFVTDVLEPKNGFKANVSIGVCGGTVRTTGVGYVSSPKYPGIGAYPSNVTCDYRIVGPPNTIFTVEIIDIDLPGREDESRDYESSEMSNSPSHGCDTQKDHFVLYSVMPDVGTNETLLDTGTFCGSHAPKRAITSDSNEILVRFRTFARTNKLFKGFRLFYNASRQSCGGELNADSGIITSIAYPSRTLNRAFCEWRITVRKGRRVKLEFLDLDFVPPDVRNMQRLIIYSDFSYASRMMFITSNNNPGVVYSSDNKLMITAWIRAPSQNRGFKIRYSSEEPSLCEGDLNADEGYIYPPNIENATSYSCTYERQNRPIVGDALGKGTVAFYLSNLDVGRRVVNCRFAATNLAFSRASAMVESEKYLARICGNASETATVLSPFPDVRFEVKQSPFFGKVNFSLHYKVHNCGGLIKGGPSAINITNPPPNTADYKKLDCAYHIKYEEGFAVALKIQRLRLKLSCEQEHITIYNGPNAMSPVLARICGDDFDRTPLISQKETVYIEYHTENFNGESRNSEFSINVDSSSFGCGGILNHLIRRFSTPLYDKPYPPNTECMWEIRADSGYQVGLYFTERFFIEASDNCTKDFLEFYDFVDNEWIFMKRVCGRDTPQPVNSTSTRLRVLFHSDGALNGDGFVAQWDQNCGGVIAVDTKKRVLTSPRYPLAYEANLRCNYTFVTSNAEDFVNIKFLDFNLEAVNGKCIYDNVTVYKWLEYMSPQEMSKVGVFCGTKNPGNFRYKNKITIIFVSDQWVERKGFQLEYSTDSCGGVVTSPTTIASVPIVRSTNSETYEYLGAMSCVWNITAPPNHKIVLKFEKIALDFSEYCSYDFVEIFSGALDDEKNRLVKLCNNLTIPPISVLDNQAVVKMRTEQSKDYLGFSAVVYFQEKCDQAFTLTLSNPSVVIDISHQQTAANLECTYKISGDPLSTLRVRFDEMHLSICDPDQRKDNCSCDYLEFFDGNGPFSRPIGRYCGHDAPIDIISTTSSLYIRFATDSIRSSNGFKLTITMQESPCGPVPYFNFTNPEQAVVLTSPRVSASTRRYPPNIRCQWTIEVPERQNIEIIFALFELEDSEGCRNDSLRIEDDMVKDYVLEGLGQETVYRGHSTHTFQPSFYMGITGPTAPHVYCGSVLPHDYFSTTNKIRIYFETNSELEFGGFDLTVRQVSSCNRNYTALQGRLMADVSVNGCHTTITVPENYTISLYFARFYFYANDCEKSFMKIYDGTFETGALLRTLCGYSTPDPVFSAGNRLSIRTKYEDDSTFFTRGNYDIMYVASERSKGPGCGGEIFNYGGLFTSPQYPSVNRTNYDCTWTVRVPSNLVVALKFQIFDMGSKLSCGKDYVEFLEENEANEFRSIKSYCGDDEPAMYVSSRSQIKIHYVQTVHFAGTGWMLHFMGIHEGSTPLDW
| Type | Start | End | Length |
| CDS |
7000 |
7019 |
20 |
| CDS |
7082 |
7297 |
216 |
| CDS |
7375 |
11902 |
4528 |
| intron |
7020 |
7081 |
62 |
| intron |
7298 |
7374 |
77 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001843996 |
cubilin [Culex quinquefasciatus] gb|EDS35495.1| cubilin [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR000859 |
CUB |
|
| Pfam |
PF02408.15 |
CUB-like domain |
3e-13 |
| Pfam |
PF00431.15 |
CUB domain |
7.5e-196 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_03406 |
| P. vanderplanki |
Pv.14800 |
| N. vitripennis |
NV13464-PA |
| T. castaneum |
TC007013 |
| A. mellifera |
GB17517-PA |
| D. plexippus |
DPOGS207300PA |
| H. sapiens |
ENSP00000367064 |
| B. mori |
BGIBMGA014545-TA |
| A. aegypti |
AAEL010965 |
| D. melanogaster |
FBgn0052702 |
| P. humanus |
PHUM104920-PA |
| P. vanderplanki |
Pv.12269 |
| C. quinquefasciatus |
CPIJ002327 |
| A. gambiae |
AGAP005526 |
| D. melanogaster |
FBgn0259140 |
| A. aegypti |
AAEL014312 |
| M. musculus |
ENSMUSG00000026726 |