MidgeBase gene description page [Pn.08886]
Outline
| Gene ID | Pn.08886 |
| Type | Protein coding gene |
| Scaffold | PnScaf8739 |
| Start | 27715 |
| End | 28758 |
| Direction | - |
Sequence
Transcript: 804 (bp)
ATGATCAACATCGCTTCAAAGGCTGGTAATTACCTACGTGCAACGAATACAGTCGTTGCCAGTGGCCTCAAACCACTTGCTGGTGCCGCAGTCGCCGAAAAGAAGTCTGTAGTGGTCGAGAAGAAGGAATATTTGTCAGTAAATTCACTCAATAAACAGCTTCCTATCGTCCCACCATACGTTCAATCAGGGTTGACAACAACGACTCAAGTTCGTTTTGCTCACACCGATGTTCAAGTTCCAGACTTCAGTGCTTATCGACGCGATTCAACACAACGATCGAACGCCAAAGCACAGTCAGCGGAGGAGAGAAAGACCTTCTCATATGCACTCGTTGGAGCGACCGCTGTGACCGCCGCATATGGAGCCAAGGTGTTGGTCAACGACTTCATCGGATCCATGAGTGCCTCAGCCGATGTCCTCGCCTTGGCCAAGATCGAAATCAAACTGAACGAGATCCCCGAGGGAAAGTCAGTGACATTCAAATGGCGTGGTAAGCCGCTCTTCATCCGCCACCGCACGGACGAGGAAATCGCCACAGAACAGAGTGTCAATCTCGCCGAGCTTAGAGACGTCCAGCACGATAGCGAACGTGCAACAAATCCCAAATGGCTCATTATCATCGGCGTGTGCACTCACTTGGGCTGCGTGCCAATCGCAAATGCCGGAGAGTTTGGTGGCTACTATTGCCCATGTCACGGTTCTCACTACGACGCCTCAGGCCGCATCAGAAAAGGACCTGCTCCTCTCAACTTAGAAGTTCCACCATACGTTTTCCCCGAGGACGGACTCTTGATCGTCGGT
Protein: 268 (aa)
MINIASKAGNYLRATNTVVASGLKPLAGAAVAEKKSVVVEKKEYLSVNSLNKQLPIVPPYVQSGLTTTTQVRFAHTDVQVPDFSAYRRDSTQRSNAKAQSAEERKTFSYALVGATAVTAAYGAKVLVNDFIGSMSASADVLALAKIEIKLNEIPEGKSVTFKWRGKPLFIRHRTDEEIATEQSVNLAELRDVQHDSERATNPKWLIIIGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPPYVFPEDGLLIVG
| Type | Start | End | Length |
| CDS |
27718 |
28181 |
464 |
| CDS |
28251 |
28391 |
141 |
| CDS |
28560 |
28758 |
199 |
| intron |
28182 |
28250 |
69 |
| intron |
28392 |
28559 |
168 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADC54384 |
ubiquinol-cytochrome c reductase [Locusta migratoria manilensis] |
4e-95 |
| InterPro |
IPR006317 |
Ubiquinol-cytochrome c reductase, iron-sulphur subunit |
|
| InterPro |
IPR017941 |
Rieske [2Fe-2S] iron-sulphur domain |
|
| InterPro |
IPR015248 |
Ubiquinol-cytochrome c reductase 8kDa, N-terminal |
|
| InterPro |
IPR005805 |
Rieske iron-sulphur protein, C-terminal |
|
| InterPro |
IPR014349 |
Rieske iron-sulphur protein |
|
| InterPro |
IPR004192 |
Ubiquinol cytochrome reductase, transmembrane domain |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0051537 |
2 iron, 2 sulfur cluster binding |
|
| Gene Ontology(MF) |
GO:0016679 |
oxidoreductase activity, acting on diphenols and related substances as donors |
|
| Gene Ontology(MF) |
GO:0008121 |
ubiquinol-cytochrome-c reductase activity |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF02921.9 |
Ubiquinol cytochrome reductase transmembrane region |
3e-24 |
| Pfam |
PF00355.21 |
Rieske [2Fe-2S] domain |
1.2e-15 |
| Pfam |
PF09165.5 |
Ubiquinol-cytochrome c reductase 8 kDa, N-terminal |
3.9e-06 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000038462 |
| A. gambiae |
AGAP008955 |
| H. sapiens |
ENSP00000306397 |
| B. mori |
BGIBMGA003066-TA |
| D. melanogaster |
FBgn0021906 |
| P. vanderplanki |
Pv.06847 |
| D. plexippus |
DPOGS210917PA |
| N. vitripennis |
NV11136-PA |
| C. quinquefasciatus |
CPIJ802391 |
| S. invicta |
SI2.2.0_16003 |
| H. melpomene |
HMEL015813-PA |
| P. humanus |
PHUM464800-PA |
| A. aegypti |
AAEL003675 |
| A. mellifera |
GB13508-PA |
| T. castaneum |
TC000043 |