MidgeBase gene description page [Pn.08783]
Outline
| Gene ID | Pn.08783 |
| Type | Protein coding gene |
| Scaffold | PnScaf8586 |
| Start | 1807 |
| End | 4342 |
| Direction | - |
Sequence
Transcript: 1140 (bp)
ATGTATGCTCTCTTCGGTTGTGACGTGAAAAACCAATTTTTCAGCCACTCGTTTGAGGTTAGCAGCTTCCTCTTCTTCATCGTCCCGATGACTGTAATTTGTGTTCTCTACATCCTCATCGGATTGAAATTAAGAAAGAGCAAGCTTCTGTACGACAACAAGGGAAAGGGCTGTGACTCACAACGCTGCATCAAGGGACAGACGCGTGTCGTGCGAATGCTGGTGGCAGTCGTCGTGTCGTTCTTCTTGTGCTTTGCGCCATTCCACTCGCAGAGGATCATGGCAATCTACGGAAAGGTTATGAACAAATCCTTTAGCTCCGACGACACGTTCATCAAAGTCTACATCGCACTGACCTACGTCTCGGGCATCACCTACTTCCTATCCACCTGCATAAATCCCTTTCTGTACAACTTAATGAGTCACAAGTTTAGGAACGCGTCGAAGCTGACGCTCGTGGTGCACTGCCTAAGTCGAACGCCGTCGACGAAGAAGACACAGCTGGGCAGCAATTACAGTGCGCTCACACTCAAGTTCGGCCCCTTAGACGCCGCACGCATGACGACGGTTAATCGCGACCATTACATAATTCCGTCAGGAAACAATAGTAGTAGTGATATAATAGAGATTAAAGAGGTTGGCAGTATTGATGAAGTACGAAATTTCAGAACAGATGGAAGCGTACCGTATCTGATGGAGCATCATCCGTATCATGCCGTCGTGCGATTTGAGCCAATGAACTTCTCCTCTTATAGCCAGCAAACAACCACGACGACAATAAGCCGCGACAACAGCTTAAAGTGCGCCAACAACAATCACAGCGATAGCAAGCTCAATTCGATTGCTAAGAAATTGAAAAAGTGCACGCAAAAGGCGTTCATATTTAGGGGCAGCGACGACGAGCAGAAGCTCCCGAACGGCGGCAGTCACTTTGGCATTCTCGCTCAGCCGATCGCCATGTCCTCGTCCAACTCCTCGGCGGCTGTCATTGTCGTCGATAGAAACTCCCTGAGTCTGAGGGAAATCGACGAGGAGAGCAATGTCGAATCACCGCGTGTCTTGGTGAAGGAAAACAACGATGATGATGACGATGATTATAGCTTGGGGCACTTTTATGGCAACAGCAGCAGCAACAACTCT
Protein: 380 (aa)
MYALFGCDVKNQFFSHSFEVSSFLFFIVPMTVICVLYILIGLKLRKSKLLYDNKGKGCDSQRCIKGQTRVVRMLVAVVVSFFLCFAPFHSQRIMAIYGKVMNKSFSSDDTFIKVYIALTYVSGITYFLSTCINPFLYNLMSHKFRNASKLTLVVHCLSRTPSTKKTQLGSNYSALTLKFGPLDAARMTTVNRDHYIIPSGNNSSSDIIEIKEVGSIDEVRNFRTDGSVPYLMEHHPYHAVVRFEPMNFSSYSQQTTTTTISRDNSLKCANNNHSDSKLNSIAKKLKKCTQKAFIFRGSDDEQKLPNGGSHFGILAQPIAMSSSNSSAAVIVVDRNSLSLREIDEESNVESPRVLVKENNDDDDDDYSLGHFYGNSSSNNS
| Type | Start | End | Length |
| CDS |
1810 |
2502 |
693 |
| CDS |
2582 |
3004 |
423 |
| CDS |
4319 |
4342 |
24 |
| intron |
2503 |
2581 |
79 |
| intron |
3005 |
4318 |
1314 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
AAX84798 |
pyrokinin-like receptor 2 [Anopheles gambiae] |
3e-46 |
| InterPro |
IPR017452 |
GPCR, rhodopsin-like superfamily |
|
| InterPro |
IPR000276 |
GPCR, rhodopsin-like, 7TM |
|
| Gene Ontology(BP) |
GO:0007186 |
G-protein coupled receptor signaling pathway |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF07895.6 |
Protein of unknown function (DUF1673) |
0.21 |
| Pfam |
PF14012.1 |
Protein of unknown function (DUF4229) |
2.5 |
| Pfam |
PF00001.16 |
7 transmembrane receptor (rhodopsin family) |
2.1e-15 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.02851 |