MidgeBase gene description page [Pn.08626]
Outline
| Gene ID | Pn.08626 |
| Type | Protein coding gene |
| Scaffold | PnScaf8322 |
| Start | 11551 |
| End | 12996 |
| Direction | + |
Sequence
Transcript: 1443 (bp)
ATGTCCAGAAGTAAGAGAACTATGGAGGAGAATAAAAGCGAAAGTGTTCGTGAGAGAATTTTGCTTAAGCCCGTGGCACTGAAACCTACCGTGAGATTCAATTATGGACTGGAGCCAGCACTCTTTCTACTCTACTTTGCCTTCTACCTGACCAATGCCGTTCTTCAGAATCAAATTTTAAAGCAAACGTGCCTGATGAAGGGCTACAATCTGACAACTTGCACAAATTTAAATACTGATGAATTCACAAAAATGGTTGAAGAAGAAGTTCAGCCTGACGTCGCAAAAATCAACATGTCGATTTTGCTGCTCAACTCAATCTTTCCGGCTCTCATCAGTCTGGTTTTGGGTTCTTGGAGCGACATCTTTGGCAGGAAGAAAATTCTCATTCTTGCTTTCACTGGGTACACCTGCACAATTGGTCTCATCACCATGTTTTCCTACATTTCCGACAACATAAATCCGCTCACTCCGTGGGTATACTTTTTTGCCGAAATGCCGATGACTTTTCTTGGTGGTTGGCCTACTTTGGATATTGCTTTTTGCTGCTATATAGCAGATTTAAGCAACGAAAGCAACCGATCGATACGACTTGGTGTCATTGGATTTCTCAACTTTTTCGGAAGCGCAGTTGCATACTTCAGCAGCTCATACATACTCAACGCAACAAGCATGCTCTTTGTATTTTCATTCGCATTCACATGTGCAGCTGTAGCTTTTTTGTGGACAGCATTTCTGGTTGATGAAACGATTCAGGCACCGAGTGTTGCGCTTCTCGACCAACTCAAGGAAATTTTCTCGCCCACGCGTGTTCGCGAAATATTCGCCTCCTTGGTAAAGCGACGTCCACAAAAGTGTCGCCGAACGTTGTGGGCACTAATAGCAATACCGGTTTGCGTAGTTTTCACGATGCACGGAAATGGAACGCTCAACTACTTATTCGTGCGTGAAAAATTCGGATGGTCACTGAGAGAGTACACCACGTTCGAGAGCACCAACACAGCCATTTCAGTTTCGGGTCTGTTTCTCGGGATTCTTTTTTTGAAAAAGTTCCTTAAGCTCTCGGACATGACCGTCGGTATTATCGCTCTCTGCTCCTCGCTTATCGACACACTGATGAAGGCTTTCGCGCAAAAAGCCTACTTGCTGTATGTCTCCTCAGGCATTACGCTATTTCGACTGCTGTCAACGCCGATGCTCAGAGCAGAAATGTCATTGGCAATGCCTCATCACGAAATTGGAAAAATTTATAGCCTGACTACTTGCTTTGAGGCCTTATCGGGACTCGGTGCTGGTCCATCTTACACAGCCATTTATAATAATACATTCACAGTTTTCACTGGCGCTTATCACTTGTTGAGTTCGGGAATGTTCACTCTAAGTCTCGTGCTGAGTATTTTCGTTCTCCGATGGAAATCACAAGGCATAACAAATGAATACGAG
Protein: 481 (aa)
MSRSKRTMEENKSESVRERILLKPVALKPTVRFNYGLEPALFLLYFAFYLTNAVLQNQILKQTCLMKGYNLTTCTNLNTDEFTKMVEEEVQPDVAKINMSILLLNSIFPALISLVLGSWSDIFGRKKILILAFTGYTCTIGLITMFSYISDNINPLTPWVYFFAEMPMTFLGGWPTLDIAFCCYIADLSNESNRSIRLGVIGFLNFFGSAVAYFSSSYILNATSMLFVFSFAFTCAAVAFLWTAFLVDETIQAPSVALLDQLKEIFSPTRVREIFASLVKRRPQKCRRTLWALIAIPVCVVFTMHGNGTLNYLFVREKFGWSLREYTTFESTNTAISVSGLFLGILFLKKFLKLSDMTVGIIALCSSLIDTLMKAFAQKAYLLYVSSGITLFRLLSTPMLRAEMSLAMPHHEIGKIYSLTTCFEALSGLGAGPSYTAIYNNTFTVFTGAYHLLSSGMFTLSLVLSIFVLRWKSQGITNEYE
| Type | Start | End | Length |
| CDS |
11551 |
12993 |
1443 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002074970 |
GK23342 [Drosophila willistoni] gb|EDW85956.1| GK23342 [Drosophila willistoni] |
6e-73 |
| InterPro |
IPR011701 |
Major facilitator superfamily |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF00083.19 |
Sugar (and other) transporter |
0.0021 |
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
3.5e-24 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.10735 |