MidgeBase gene description page [Pn.08612]
Outline
| Gene ID | Pn.08612 |
| Type | Protein coding gene |
| Scaffold | PnScaf8304 |
| Start | 12153 |
| End | 13321 |
| Direction | - |
Sequence
Transcript: 1044 (bp)
ATGGAAGAAATAAAATTAGAAGATTTATTTAGCGACGCATATAAATTATTCGAGGCATTCGATAAGCGCGATGATCCCACAAACAGTCCAGAGTTTCAGGATGATGTTAAAAGGTGCATTCGAATGTTGGAGGATTCAACTCGACTAGTGAACATGAGCGGAATGTTTAGCAAAAACGAATCACACGAAGAAATAGCCACGGATAATCTGAAATATTTACTTCTGCCCTTCCTTCTTGCACAAGCGACTCTGAAATTAACTAATGTACAGGACCGGAAAAATGTTGTGGATGTGGCAAAAATATACTACGACGACTTTCTGAAACGCTGCGAGGAATATGGATTGTGTGAGCGAAGCACCACGGCAGTTTCGAAAAATCAAGATATAATTTTACGAGACGAAATTCAAAGACTTACTCAAATGGCCCAGCAAAGAAACCAAAAACTACAAAAGTATCAGAAAAAGAAGGAACTGAAGGATCAAATTAAACAACTGAAAGTCGCAATGGAACGTGATCACACAGACGAGGAAGTCAAGAGAAATTTTTATCTGAAGCTCATAAAGTCGTGTGTGTGGGAGACACAAGACGAGTTGTCTACATTGGAGCAAGAGTGTGAAATACTTGAACATATCGCTAAACTTAAGGAGCACGATCCGGAGTTTAGGCAGCAGGCGCTTGAATCGACCTCCACCACCAAGCCGCCACCTGCAACCGTTCCGCTCAAGCCCATCATAATTACAAAAGATCAGCTTCAGAAGGCCGTCTACGGAGCAGGTTATCCATCGTTGCCGACCTACACGATCGAGGAGTTTTACGATCAGCGCGTTGCTGAGGGAACATTTCCAAGTGCAGAGCAAGTCGCAAAGCAAAACTCTTTGCAGGGCAAGTGCGAGATTGATCAGGAGGCGGAGCAGGCAAAGGAGGAGGAAGAAAAGGAACAAAAGATCGAAAGAGACGATGACGAATACTTGGAGCGCGCTCGCAACATGGATGAATACAAGGATGACCATCGTCGCGGCTATGGCAATCGCTACAACAGAAGC
Protein: 348 (aa)
MEEIKLEDLFSDAYKLFEAFDKRDDPTNSPEFQDDVKRCIRMLEDSTRLVNMSGMFSKNESHEEIATDNLKYLLLPFLLAQATLKLTNVQDRKNVVDVAKIYYDDFLKRCEEYGLCERSTTAVSKNQDIILRDEIQRLTQMAQQRNQKLQKYQKKKELKDQIKQLKVAMERDHTDEEVKRNFYLKLIKSCVWETQDELSTLEQECEILEHIAKLKEHDPEFRQQALESTSTTKPPPATVPLKPIIITKDQLQKAVYGAGYPSLPTYTIEEFYDQRVAEGTFPSAEQVAKQNSLQGKCEIDQEAEQAKEEEEKEQKIERDDDEYLERARNMDEYKDDHRRGYGNRYNRS
| Type | Start | End | Length |
| CDS |
12156 |
13100 |
945 |
| CDS |
13223 |
13321 |
99 |
| intron |
13101 |
13222 |
122 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001648171 |
chilling-inducible protein, putative [Aedes aegypti] gb|EAT33543.1| chilling-inducible protein, putative [Aedes aegypti] |
1e-103 |
| InterPro |
IPR007304 |
TAP42-like protein |
|
| Gene Ontology(BP) |
GO:0009966 |
regulation of signal transduction |
|
| Pfam |
PF09831.4 |
Uncharacterized protein conserved in bacteria (DUF2058) |
2.1 |
| Pfam |
PF04177.7 |
TAP42-like family |
5.8e-88 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ801747 |
| A. gambiae |
AGAP008797 |
| H. melpomene |
HMEL009190-PA |
| A. aegypti |
AAEL014187 |
| A. aegypti |
AAEL003054 |
| D. plexippus |
DPOGS202196PA |
| B. mori |
BGIBMGA013517-TA |
| P. humanus |
PHUM423730-PA |
| P. vanderplanki |
Pv.03980 |
| D. melanogaster |
FBgn0051852 |
| N. vitripennis |
NV10870-PA |
| T. castaneum |
TC013692 |
| H. sapiens |
ENSP00000348784 |
| M. musculus |
ENSMUSG00000046717 |
| A. mellifera |
GB15132-PA |
| H. sapiens |
ENSP00000363661 |
| S. invicta |
SI2.2.0_06240 |
| M. musculus |
ENSMUSG00000031221 |