MidgeBase gene description page [Pn.08596]
Outline
| Gene ID | Pn.08596 |
| Type | Protein coding gene |
| Scaffold | PnScaf8298 |
| Start | 46048 |
| End | 49439 |
| Direction | + |
Sequence
Transcript: 711 (bp)
ATGCTGCTATTCGCACATTTATGCTCGAGAAATTCTGCACTTGAAAAAATGCCAGGACAACAAACACAAGTTGTGCATCCGAGCGACGGAGGATACGGAGAGTCTTTTCGCTATGACAAAAACTTTCGGGGTCCGCTGGCCAAGCGAGGATGCACCGATGTCATATGTCTCCTCATGTTCTTCATCTTTTTGATTGCGTTCGGCTTCACGGGTTACTTTGCGAAGCGAGAGGGTGACCTAGACAAGCTGCTGATTCCTCGCAACTCGAAGGGCCATCTCTGCGGATTCGACAGCGAAGTTCGAGACAAGAAATTCTTGTTCTTCTTCGACTTGTCGAAATGTGCCGATGCGAGTGTTGCATACGACGGATGTCCAACACCCCAGATCTGTGTCAAAGAATGCCCGACGGAGACATTTATTCACAATAAAGATCAGTGCAAGAGTGATCTTGCGAGTTACCGCAAGAAACTCATCTGCACCGATAAAGTGGACGTTTCGAAGCTTAGCTGTGATGAAATCGACATGAAGGTGAACAATCAAGAGTGCGCAAAATTTTACTTGAGTTCAGAACCATTGGGCAACCGATGTCTTCCAACGAAAATCGAAGATGTAGTGGGAATCGTAACACAATCGGATATGATTAAGATCTTTGAGAATATTCAGTTATTCGGATCCGTGAGTGGACTTTATTGTAATAATCAATATGCAAAA
Protein: 237 (aa)
MLLFAHLCSRNSALEKMPGQQTQVVHPSDGGYGESFRYDKNFRGPLAKRGCTDVICLLMFFIFLIAFGFTGYFAKREGDLDKLLIPRNSKGHLCGFDSEVRDKKFLFFFDLSKCADASVAYDGCPTPQICVKECPTETFIHNKDQCKSDLASYRKKLICTDKVDVSKLSCDEIDMKVNNQECAKFYLSSEPLGNRCLPTKIEDVVGIVTQSDMIKIFENIQLFGSVSGLYCNNQYAK
| Type | Start | End | Length |
| CDS |
46048 |
46055 |
8 |
| CDS |
46468 |
46556 |
89 |
| CDS |
47834 |
48310 |
477 |
| CDS |
49143 |
49252 |
110 |
| CDS |
49410 |
49436 |
27 |
| intron |
46056 |
46467 |
412 |
| intron |
46557 |
47833 |
1277 |
| intron |
48311 |
49142 |
832 |
| intron |
49253 |
49409 |
157 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661235 |
ctl2 [Aedes aegypti] gb|EAT46520.1| ctl2 [Aedes aegypti] |
1e-38 |
| InterPro |
IPR007603 |
Choline transporter-like |
|
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ006004 |
| H. sapiens |
ENSP00000392054 |
| H. sapiens |
ENSP00000398901 |
| H. sapiens |
ENSP00000404572 |
| H. sapiens |
ENSP00000398764 |
| H. sapiens |
ENSP00000414296 |
| H. sapiens |
ENSP00000400263 |
| H. sapiens |
ENSP00000415708 |