MidgeBase gene description page [Pn.08588]
Outline
| Gene ID | Pn.08588 |
| Type | Protein coding gene |
| Scaffold | PnScaf8298 |
| Start | 9176 |
| End | 10138 |
| Direction | + |
Sequence
Transcript: 753 (bp)
ATGATTCGTCAAATTGTTGTTCTGCTGGCAGTCATTGCCGTGGCCCTTGCTTCTCCCTTTGATCGCGAGAGCCGAATTGTGGGCGGCACAAATGCCAACATCGCCGACCTCCCATGGCAAGTTTCGCTGAGAACTCTCGCCAACTTCCACTTCTGCGGCGGCAGCATCATCTCCAACCGCTGGATTGTTTCGGCCGCTCACTGCACAGTCGGACGCGCTGGAAACTCAATCAACGTCGTCGTCGGCACTCACTTCCTCAACTCGGGCGGCGTTGCTCATCGCAGCAACCGCATTTTCAACCATCCAAGCTACAACGCCAACACAATCGCCAACGACGTCTCCTGCGTGGAAACTGCAACGACCATTGCATTCACAACACAAGCTAGAGCCATCGTCATGAACGCCAACTTCATCGGCGGCGGACAGAGAGCCGTTGTCAGTGGATGGGGTGGAACTACCCATGGCGGCCCATCACCAAACCAACTTCAGCGCCTCACTAAGACCACCTTGACCAATGCTGACTGCAGAGCTCGCCACACCGCCCAAAACGCTCAATTCGTCTTCGACCACAAGATCTGCACATTCAACCGTGCTGGTGAAGGAATCTGCCAAGGAGACAGCGGTGGACCTTTGGCCCTCAACAACCAACTTATCGGCATTGTTTCGTGGAACATCCCATGTGCCCGTGGCTTCCCAGATGCTTTCGACAGAATTTCCTCGCACCGCAACTGGATCCGTCAAATCACTGGCGTT
Protein: 251 (aa)
MIRQIVVLLAVIAVALASPFDRESRIVGGTNANIADLPWQVSLRTLANFHFCGGSIISNRWIVSAAHCTVGRAGNSINVVVGTHFLNSGGVAHRSNRIFNHPSYNANTIANDVSCVETATTIAFTTQARAIVMNANFIGGGQRAVVSGWGGTTHGGPSPNQLQRLTKTTLTNADCRARHTAQNAQFVFDHKICTFNRAGEGICQGDSGGPLALNNQLIGIVSWNIPCARGFPDAFDRISSHRNWIRQITGV
| Type | Start | End | Length |
| CDS |
9176 |
9230 |
55 |
| CDS |
9301 |
9688 |
388 |
| CDS |
9751 |
9992 |
242 |
| CDS |
10068 |
10135 |
68 |
| intron |
9231 |
9300 |
70 |
| intron |
9689 |
9750 |
62 |
| intron |
9993 |
10067 |
75 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001861618 |
chymotrypsin-2 [Culex quinquefasciatus] gb|EDS35878.1| chymotrypsin-2 [Culex quinquefasciatus] |
1e-68 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00089.21 |
Trypsin |
6.1e-48 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ006019 |
| A. gambiae |
AGAP008296 |
| H. sapiens |
ENSP00000401828 |
| A. gambiae |
AGAP009966 |
| C. quinquefasciatus |
CPIJ006018 |
| A. aegypti |
AAEL006425 |
| N. vitripennis |
NV17056-PA |
| C. quinquefasciatus |
CPIJ018339 |
| A. gambiae |
AGAP008295 |
| T. castaneum |
TC007017 |
| A. mellifera |
GB14774-PA |
| T. castaneum |
TC030063 |
| H. sapiens |
ENSP00000455361 |
| T. castaneum |
TC007019 |
| P. vanderplanki |
Pv.14648 |
| A. aegypti |
AAEL010196 |
| N. vitripennis |
NV16296-PA |
| C. quinquefasciatus |
CPIJ004660 |
| M. musculus |
ENSMUSG00000057163 |
| H. sapiens |
ENSP00000354280 |
| N. vitripennis |
NV16299-PA |
| M. musculus |
ENSMUSG00000071519 |
| A. aegypti |
AAEL010203 |
| P. vanderplanki |
Pv.10786 |
| A. gambiae |
AGAP008293 |
| A. aegypti |
AAEL013714 |
| H. sapiens |
ENSP00000461732 |
| N. vitripennis |
NV16298-PA |
| N. vitripennis |
NV18381-PA |
| T. castaneum |
TC008504 |
| A. mellifera |
GB13791-PA |
| N. vitripennis |
NV22804-PA |
| N. vitripennis |
NV16301-PA |
| H. sapiens |
ENSP00000340889 |
| H. sapiens |
ENSP00000456828 |
| N. vitripennis |
NV18382-PA |
| H. sapiens |
ENSP00000368715 |
| H. sapiens |
ENSP00000459226 |
| A. gambiae |
AGAP008294 |
| A. aegypti |
AAEL010195 |
| M. musculus |
ENSMUSG00000029882 |
| M. musculus |
ENSMUSG00000058119 |
| P. vanderplanki |
Pv.15007 |
| D. melanogaster |
FBgn0051954 |
| N. vitripennis |
NV17678-PA |
| A. aegypti |
AAEL013713 |
| C. quinquefasciatus |
CPIJ005132 |
| T. castaneum |
TC030064 |
| M. musculus |
ENSMUSG00000071517 |
| A. aegypti |
AAEL010202 |
| T. castaneum |
TC011014 |
| H. sapiens |
ENSP00000417854 |
| M. musculus |
ENSMUSG00000062751 |
| N. vitripennis |
NV18383-PA |
| C. quinquefasciatus |
CPIJ801564 |
| P. vanderplanki |
Pv.16693 |
| N. vitripennis |
NV14680-PA |
| A. gambiae |
AGAP008291 |
| D. plexippus |
DPOGS209537PA |
| C. quinquefasciatus |
CPIJ004659 |
| A. gambiae |
AGAP008290 |
| M. musculus |
ENSMUSG00000071521 |
| A. aegypti |
AAEL013712 |
| M. musculus |
ENSMUSG00000054106 |
| D. melanogaster |
FBgn0015316 |
| H. melpomene |
HMEL007028-PA |
| A. gambiae |
AGAP008292 |
| H. sapiens |
ENSP00000308720 |
| N. vitripennis |
NV16300-PA |