MidgeBase gene description page [Pn.08572]
Outline
| Gene ID | Pn.08572 |
| Type | Protein coding gene |
| Scaffold | PnScaf8265 |
| Start | 131 |
| End | 2370 |
| Direction | + |
Sequence
Transcript: 279 (bp)
ATGGACTCTGACATTGTCCTCTCAACTTTGACATTGGGCGTTCTCAAAATTGCCATCGCAAAGGAGTCGAATCAACTCAACACCGTCCAGTTCGATCCGCCGCTGCCGCAATGGAAACAGACGGCCATCGAGCGTCTCGGCTTTGGCAACCTCAACAAGGTCGTCCTGTGCTTCGATCGAGTGTTTTGGGAGCCCGACGTAAATCTCTTCGGACACGTCGGCAGCACGACGGCCAGTCGCGGTGAGTTTGCACATTATGCCTCCTTGACTACCGACTTT
Protein: 93 (aa)
MDSDIVLSTLTLGVLKIAIAKESNQLNTVQFDPPLPQWKQTAIERLGFGNLNKVVLCFDRVFWEPDVNLFGHVGSTTASRGEFAHYASLTTDF
| Type | Start | End | Length |
| CDS |
131 |
137 |
7 |
| CDS |
2096 |
2367 |
272 |
| intron |
138 |
2095 |
1958 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001655324 |
lysine-specific histone demethylase [Aedes aegypti] gb|EAT36484.1| lysine-specific histone demethylase [Aedes aegypti] |
4e-34 |
| InterPro |
IPR002937 |
Amine oxidase |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF01593.19 |
Flavin containing amine oxidoreductase |
3.6e-24 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.02941 |
| Pn.00785 |
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.13725 |
| D. plexippus |
DPOGS203174PA |
| B. mori |
BGIBMGA011022-TA |
| N. vitripennis |
NV20473-PA |
| P. vanderplanki |
Pv.10283 |
| C. quinquefasciatus |
CPIJ002197 |
| A. mellifera |
GB12774-PA |
| P. humanus |
PHUM106950-PA |
| H. sapiens |
ENSP00000439072 |
| H. sapiens |
ENSP00000383042 |
| M. musculus |
ENSMUSG00000036940 |
| D. melanogaster |
FBgn0260397 |
| N. vitripennis |
NV30470-PA |
| H. melpomene |
HMEL005792-PA |
| H. melpomene |
HMEL013878-PA |
| A. gambiae |
AGAP011661 |
| D. plexippus |
DPOGS203173PA |
| A. aegypti |
AAEL011415 |
| P. humanus |
PHUM107180-PA |
| H. sapiens |
ENSP00000349049 |
| C. quinquefasciatus |
CPIJ002196 |
| B. mori |
BGIBMGA011023-TA |