MidgeBase gene description page [Pn.08507]
Outline
| Gene ID | Pn.08507 |
| Type | Protein coding gene |
| Scaffold | PnScaf8174 |
| Start | 36 |
| End | 2064 |
| Direction | + |
Sequence
Transcript: 1737 (bp)
ATGGCTACATCGAATCGCGAAGGAACGGCCTTAATTGAGACGATTGCGGGATTGCGTGAGAGATTAGGCGGAGAGATTTTGATTAACGGTCAGCAAGTTTCGAAGGGAATGCTGAAGCAATTGTGTGGATATGTGCCTGCATTGGAAATTGCGTCTCTCGATCCGCGAATGAGTGTTCAACATACGCTCACCTATCAGGCCGCTCTCAAGGGACCGCTCGACAAAAGCGACCTCAAAGAAAGGATTGATATACTCGTTGAGGATTTAGGACTAACGGCTGTTCGATCGTCATGCATATCAAGTTTGACTCATTCGGAGAAGCAGCGCTTGAATGTCGCATGCCAGTTACTCACCCAATGCTCAGTTTTAGTTCTCGATCAAACGACAAATAACATGGACATTTTCGATACATTCTTTCTCGTCGAATATCTGAGGCAGTGGTGCAGCTCGAGAATTTGCATCATGACTTTGCAGCCGCCTACTTTTGAGATACTCTCAATGTGCTCTGGGGTGCTGCTCTTGTCCGGAGGAAGAACAATCTTTAGCGGTAATCGAGCGGACCTGCCCAGACACATGAGCCAACTTGGTTATCCATGTCCGCCATTTAAGAATCCAGCCGACTACTACCTGGACCTCGTTACTCTCGACGATTTATCAGCGGCAGCTCTGCTGGAGTCGTCAGCTCGAATCGAATCATTAGCGAATGCGTGGGATAGAATGAATTCTGAACCACCTTTGGCGGCGCCACTAACAAGCCTGCCCGATCCTACGAAATCGGCCGGCTTTTTCGGACAAATCGGAACATTGTGCAAGCGCTTCATATCCTATAAACAGCCGGGTTCGCTTCTCATGTGGATCAGTCGAGTTATAATCGCAGCAGTGCTCTCATTGTGCGTTGGCGGAATTTTCTGGGACATTCCATCTACCGATCCACTGCTGACATATAACGATCGATTAGGCTATCATCACACTATCATGTCGATTGCTCTTTGGCCGCTGCTTGTTTTAATTATTCGTGACATACAAAACGACAGGAAGCATGCCGAGAAGGATATTTACTTGCAATTGTATAGTCGAACCGTTTACATTTTTGTACAATCAATTCTTGGCGTATTGCCAAGCATTTGCATCTGGATAGCCTACTTGTTACCTGCACACAGTATGGCAGGTCTTTATGTGTACACCGCAAGCAATGACGCTGGAATTTACTTGTACATGGGCTACATGATTCTCTACCTTATGACCACTCAAACACTTGCACTCTTTGTTTCCCATCTCGTATCACCGCACAAAACGGTTGCATCACTCTTCACAATGCTAATATTGGTCGTTGCAAATATCTCCGTTGGAGGATATTTTGTTCACCCGTCCAACGTACCTGACTTCATGCGATGGCTGGAGTATGCCTCGCCGATGAAATGGGCTCTTCCAGTGTTGACGAAAGACGAGTACAGCGATGAAACTATTGCGAATTCCGGAGCCATGCAGCTTTGCCGGAACAAACACGTTCAACGCCAGGAAATTATCGTTCAGCAGCCTTGTAAAATAAATGGATCGGAAATTTTGTTCGATTTCAAGTTGCAGCCTCATCAACATGTACTCGACTCATCAGATATTTATGCGTCGACACTAATAGGCATGCTCGTTGCATGCGCTGGTCTTTTTCTTTTGACATCTTTGTCGTTCATTGCCAACACCAGTAGAATATTTGTTAAAAGTCGAAATAACAAAAGACGA
Protein: 579 (aa)
MATSNREGTALIETIAGLRERLGGEILINGQQVSKGMLKQLCGYVPALEIASLDPRMSVQHTLTYQAALKGPLDKSDLKERIDILVEDLGLTAVRSSCISSLTHSEKQRLNVACQLLTQCSVLVLDQTTNNMDIFDTFFLVEYLRQWCSSRICIMTLQPPTFEILSMCSGVLLLSGGRTIFSGNRADLPRHMSQLGYPCPPFKNPADYYLDLVTLDDLSAAALLESSARIESLANAWDRMNSEPPLAAPLTSLPDPTKSAGFFGQIGTLCKRFISYKQPGSLLMWISRVIIAAVLSLCVGGIFWDIPSTDPLLTYNDRLGYHHTIMSIALWPLLVLIIRDIQNDRKHAEKDIYLQLYSRTVYIFVQSILGVLPSICIWIAYLLPAHSMAGLYVYTASNDAGIYLYMGYMILYLMTTQTLALFVSHLVSPHKTVASLFTMLILVVANISVGGYFVHPSNVPDFMRWLEYASPMKWALPVLTKDEYSDETIANSGAMQLCRNKHVQRQEIIVQQPCKINGSEILFDFKLQPHQHVLDSSDIYASTLIGMLVACAGLFLLTSLSFIANTSRIFVKSRNNKRR
| Type | Start | End | Length |
| CDS |
36 |
278 |
243 |
| CDS |
353 |
737 |
385 |
| CDS |
807 |
1397 |
591 |
| CDS |
1475 |
1761 |
287 |
| CDS |
1831 |
2061 |
231 |
| intron |
279 |
352 |
74 |
| intron |
738 |
806 |
69 |
| intron |
1398 |
1474 |
77 |
| intron |
1762 |
1830 |
69 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_320998 |
AGAP002050-PA [Anopheles gambiae str. PEST] gb|EAA01067.5| AGAP002050-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR003439 |
ABC transporter-like |
|
| InterPro |
IPR013525 |
ABC-2 type transporter |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0016887 |
ATPase activity |
|
| Pfam |
PF01061.19 |
ABC-2 type transporter |
3.6e-16 |
| Pfam |
PF12698.2 |
ABC-2 family transporter protein |
0.13 |
| Pfam |
PF00005.22 |
ABC transporter |
6.9e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS210111PA |
| T. castaneum |
TC011713 |
| P. vanderplanki |
Pv.09186 |
| H. melpomene |
HMEL005061-PA |
| P. humanus |
PHUM576380-PA |
| A. aegypti |
AAEL011265 |
| S. invicta |
SI2.2.0_15281 |
| N. vitripennis |
NV10162-PA |
| B. mori |
BGIBMGA000220-TA |
| A. gambiae |
AGAP002050 |
| C. quinquefasciatus |
CPIJ005341 |
| D. melanogaster |
FBgn0051121 |
| A. mellifera |
GB14503-PA |