MidgeBase gene description page [Pn.08463]
Outline
| Gene ID | Pn.08463 |
| Type | Protein coding gene |
| Scaffold | PnScaf8106 |
| Start | 6807 |
| End | 8003 |
| Direction | + |
Sequence
Transcript: 750 (bp)
ATGAAAAAACTCTCAACTCTCATGAAGACTTCAAGTCACTTGGCGAAAGGCTCACAACGGCCATCGTTCGACGGCACCAGCTTGTGTCTCTACTCGATGAGGTACTGCCCGTACGTGGAGCGCGTCAACCTCGTGCTGGACGCGAAAAACATTCCCTACAACACGATCTTCGTGAACCTCGTCGCGCGACCCGAGTGGTTCCCGAAGGGCTTCTCGAAGGTGCCGCTGCTGGAGCTGCCCGAAGCGCCGGGAAGACCGATCGGCGAGTCGCTGATCATCTGCGACTTCCTGGACGAGCAGTTCCCGCAGAACAGGCTCAGTTCGAGCGACCCGCTGCAGAGGGCGCGCGACAGGCTGGTCGTGCAGAAGTTCGACGCGATCGCCGGCCGTCTGCGGAAGATTGTGTTCCTCAAGAGCGACGACCGACAGCCGGGTTTCGCCGAGTGGCTGTACGCGAAGTTCGACGAGTTCGAGGCAGAGCTGGCGGAGAGGCGGTCGACGTTTTTCGGCGGCGCGAAGCCCGGCATGACGGACTTCATGGTGTGGCCTTGGTTCGAGCGATTCGACGTGCTGAACTTCCTGCCCGACCACAAGTTTGAGGTTTGCGAGCAGCGATTTCCGCGAATCTCGACGTGGATCCGGCAAATGATGGAGGACGACGCAGTGAAGGCAAATTTCATTCCGGCCGAGGATCACTTTCACTTTTTCGCGACGCGCGAGTTCGATTTCAGCACAAAATCTGCTAAATTG
Protein: 250 (aa)
MKKLSTLMKTSSHLAKGSQRPSFDGTSLCLYSMRYCPYVERVNLVLDAKNIPYNTIFVNLVARPEWFPKGFSKVPLLELPEAPGRPIGESLIICDFLDEQFPQNRLSSSDPLQRARDRLVVQKFDAIAGRLRKIVFLKSDDRQPGFAEWLYAKFDEFEAELAERRSTFFGGAKPGMTDFMVWPWFERFDVLNFLPDHKFEVCEQRFPRISTWIRQMMEDDAVKANFIPAEDHFHFFATREFDFSTKSAKL
| Type | Start | End | Length |
| CDS |
6807 |
6855 |
49 |
| CDS |
7231 |
7746 |
516 |
| CDS |
7816 |
8000 |
185 |
| intron |
6856 |
7230 |
375 |
| intron |
7747 |
7815 |
69 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADK66966 |
glutathione s-transferase [Chironomus riparius] |
4e-58 |
| InterPro |
IPR005442 |
Glutathione S-transferase, omega-class |
|
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0004364 |
glutathione transferase activity |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
5.1e-11 |
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
4.5e-10 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
1.3e-05 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
2.7e-15 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
1.5e-05 |
| Pfam |
PF00462.19 |
Glutaredoxin |
0.037 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes