MidgeBase gene description page [Pn.08456]
Outline
| Gene ID | Pn.08456 |
| Type | Protein coding gene |
| Scaffold | PnScaf8105 |
| Start | 21436 |
| End | 23718 |
| Direction | + |
Sequence
Transcript: 2088 (bp)
ATGAAATTATTCCTGCTTCTAGCTTTCGTATTTAATCTGACTCACTCACTAAGACAGTACACAAAAGAGGATGTCTTGAAACTGAGAGAGGGAGTCAAGAAGATGTTTTATCACGGCTACGATAGCTACTTGAAACATGCTTCAAATTACGATGAGCTGAGGCCGTTGAGCTGCTCCGGTGTGAACACGTGGAGCAGCAGTAGCCTCACGCTCATCGACTCGCTCGACACGCTAATCGTGATGGGAAATTACACCGAATTCAAGCGAGTCACCGAGTATCTGGTGGAGAATTTAGACTTCGACAAAGACATCAACGTGTCAGTGTTCGAGACGAACATCAGACTTGTTGGCGGTCTGCTGTCTGCTCATCTCCTCTCACACAAGGCGGGTCTCAATTATGTCGGTTTCCCCTGCACCGGCCCTCTCCTCAAGTTAGCCGAGAAAATCGCCCGAAAGCTGCTGCCTGCATTCGACACAAAAACCGGAATGCCCTACGGAACCGTCAACCTCAAGTACGGCGTGCCTGAAAACGAGACGCCAATCACTTGCGTAGCCGGAATCGGCACCTTCATCGTTGAGTTCGGTGCGCTGTCGCGACTCACTGGCGACCCGATTTTCGAGGAGGTCGCAGTCAATGCGCTGTACTCGCTCTACAATCATCGCTCACAGATCGGACTGCTGGGCAACCACATCGACGTCAACACCGGCGTCTGGACGGCGCAGGACTCGGGCATCGGTGCGGGAGTCGACTCCTACTACGAGTACCTCGTGAAGGGAGCAATTCTGCTGAATCGCCCCGAGTTCATGGAGATGTTCAACGAAAACCGCAGGGTCCTCGACAAGTACCTCAACAAGGACGACTGGCAAGTGTGGGTGTCGATGAGCAAGGGCCAAATGACGCTGCCCGTCTTCCAAAGTCTGCAGGCCTTTTGGCCCGGCCTTCTGTCGCTGGTCGGCGACGTAAACATAGCGATGAAAATCCTCTTCAACATGGCGACCGTGTGGAAGCAATACGGCTTTCTCGCCGAGATGTACAACATTCCGAATGGCGAGCCGACGGCGAACCGCGAGAGCTATCCGCTGCGTCCCGAGCTAATTGAGTCCGTCATGTACTTGTACCGGGCGACGGGCGATCCGTTTTTGCTCGAGATAGGCGAGGACATCTTTCACTCGATTGAGCACAGCGCGAAAACGAGCTGCGGCTATGCGACGATCAAGAATGTCAAAGACCATCGCAAGCAGGACACGATGGAGTCGTTCTTCTTGGCGGAGACCACAAAGTACCTCTACCTCCTCTTCGATCCCGACAACTTCCTCAACAACGACGGCAGCTACGGCACGATCGTCGACACCAAGAACGGCGAGTGCGTCATCGAGTCCGCCTACATCTTCAACACGGAGGCTCATCCAATTGACCTGGGAGCGCTGAAGTGCTGCTACGACTTGCCGCGAGAGTCGCTGGTCAAGGGCTTCGACAAGATGAAATTCATGGGCGAGCTGGCGATTGAGAAGCCACAGGCGGACTTTGGCGAAAATTCAGCTCGCTTTGACGACGAAATGACGGCGGACGAGAGCTCGGAGAGCGACTTCAAGAAGCAGCTGATGGAGGAGATCATGAGCGCTCTCTCGAATGCCAACAAAAAAATGAAGCAGAAGGAAAGCTCCGAAGTCCACAAGCGCTTCGTCGAGATGACAAATCGAGAGAAATATGCGGAGGAAACGAGAGCTGTTGAGCCGGAGTCTTCGTCGGAGGAGAGCGAAGACCAGAAGCTCGAGACGATTCGTCTCTCCTCAAACGCCCTCGACTCGGACGACGCCAATCAGTCGAAGTACGACGAGTACGAAGAAATTAAGGGAGCTGAGAGTGTGAGGGAGGAAAACGCCACGAGTGAGGGCACCAGCAGCGAGACGAGAACTACTGCAACTACCAAGCAAAAGAAGAAGTTTGATCCGCAAACGGTGCTCGAGAAAATCCGCAACCAGCAGTACGGCTACGCGCGCAACGAAACCTGGTCGACAAAGTACGAGCTGATGTCGTGCAAGGCGCAGGCCTACGGAAACAGGATCTCGGTCATGGGAGAGTTTTAT
Protein: 696 (aa)
MKLFLLLAFVFNLTHSLRQYTKEDVLKLREGVKKMFYHGYDSYLKHASNYDELRPLSCSGVNTWSSSSLTLIDSLDTLIVMGNYTEFKRVTEYLVENLDFDKDINVSVFETNIRLVGGLLSAHLLSHKAGLNYVGFPCTGPLLKLAEKIARKLLPAFDTKTGMPYGTVNLKYGVPENETPITCVAGIGTFIVEFGALSRLTGDPIFEEVAVNALYSLYNHRSQIGLLGNHIDVNTGVWTAQDSGIGAGVDSYYEYLVKGAILLNRPEFMEMFNENRRVLDKYLNKDDWQVWVSMSKGQMTLPVFQSLQAFWPGLLSLVGDVNIAMKILFNMATVWKQYGFLAEMYNIPNGEPTANRESYPLRPELIESVMYLYRATGDPFLLEIGEDIFHSIEHSAKTSCGYATIKNVKDHRKQDTMESFFLAETTKYLYLLFDPDNFLNNDGSYGTIVDTKNGECVIESAYIFNTEAHPIDLGALKCCYDLPRESLVKGFDKMKFMGELAIEKPQADFGENSARFDDEMTADESSESDFKKQLMEEIMSALSNANKKMKQKESSEVHKRFVEMTNREKYAEETRAVEPESSSEESEDQKLETIRLSSNALDSDDANQSKYDEYEEIKGAESVREENATSEGTSSETRTTATTKQKKKFDPQTVLEKIRNQQYGYARNETWSTKYELMSCKAQAYGNRISVMGEFY
| Type | Start | End | Length |
| CDS |
21436 |
21521 |
86 |
| CDS |
21583 |
22052 |
470 |
| CDS |
22112 |
23472 |
1361 |
| CDS |
23545 |
23715 |
171 |
| intron |
21522 |
21582 |
61 |
| intron |
22053 |
22111 |
59 |
| intron |
23473 |
23544 |
72 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001863024 |
mannosyl-oligosaccharide 1,2-alpha-mannosidase IB [Culex quinquefasciatus] gb|EDS37927.1| mannosyl-oligosaccharide 1,2-alpha-mannosidase IB [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR001382 |
Glycoside hydrolase, family 47 |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005509 |
calcium ion binding |
|
| Gene Ontology(MF) |
GO:0004571 |
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
|
| Pfam |
PF01532.15 |
Glycosyl hydrolase family 47 |
2.2e-138 |
| Pfam |
PF00242.12 |
DNA polymerase (viral) N-terminal domain |
4.6 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000443528 |
| D. melanogaster |
FBgn0023511 |
| H. melpomene |
HMEL007099-PA |
| S. invicta |
SI2.2.0_11100 |
| P. humanus |
PHUM377490-PA |
| N. vitripennis |
NV12540-PA |
| A. mellifera |
GB10575-PA |
| C. quinquefasciatus |
CPIJ012733 |
| H. sapiens |
ENSP00000441642 |
| P. vanderplanki |
Pv.11505 |
| T. castaneum |
TC007447 |
| A. aegypti |
AAEL005639 |
| A. gambiae |
AGAP012463 |
| B. mori |
BGIBMGA001011-TA |
| D. plexippus |
DPOGS205662PA |
| H. sapiens |
ENSP00000363616 |
| H. sapiens |
ENSP00000441548 |
| M. musculus |
ENSMUSG00000038312 |
| H. sapiens |
ENSP00000363615 |