MidgeBase gene description page [Pn.08438]
Outline
| Gene ID | Pn.08438 |
| Type | Protein coding gene |
| Scaffold | PnScaf8095 |
| Start | 39873 |
| End | 41327 |
| Direction | + |
Sequence
Transcript: 1176 (bp)
ATGAAAATAATTCGAAAGACTTCATCGGTGGTTTTGCTAATACTAATCTCAACATTTGTGCTCGCCCTCCACTTAATGAACAATTACGTGTTCGAGTTGTCGATTGCTCGCTACAAATTAATTCAATTAAAGACAGAACTGACGAGCGATCGCGAGAAATTTTTCGTTCTCTTTTGGACGAAGTTCTTTGACATTCCCTACTGGAATATGGGCAATGAAACAAACGGTCCGGAGTATTTAGAAGCAATTAACTGTCCCGTCACAAATTGCGTTTTTACCCACAATAAAGATCTAATTAATCCAGTTTATTACTACGATGCCATCATCTTTCACGCAGCACAATCGTGGGGCATCATGGATCTGCCTTCTTTGAGAAGCACTCATCAGCTGTACGTAATGGCCTCGCAAGAATCACCAGCTGAGACCAAACACAATCTATCGTTGGACGATTATTTCTTCAACATCACCATGACCTATCGACTAGACTCGGACATAAACTGGAGCTACGCGAGAGTCTTTGATATTGCCACGGGTCGTTTGATTGCGCCATCTAAAAATGCCCATTGGAGGCAACCGGAAGACGTCGAAGATAAAAACCTTCATTCAGTTTTTGGAAGGAAAACGAAAGAAGTGGCGTGGTTCGTCTCGCACTGCAAAGTGTTTTCTAAACGCGACCAACTGGTGAAAAAACTAAAACAATACGTTGGCATTGATGTGTATGGAAAGTGCGGCGATTTGGAGTGTCCACGTGACAAGACTTTGGAGTGCAGCGAAAAATACAAATTTTATCTCTCATTCGAGAATGCCTTATGTAAAGATTACGTTACCGAGAAGCTGTTCAACATGATGAATGGCTACGTAATTCCCGTTGTGTTTAATGGCGCTGATGACATGACAAATTTTTTACCGCCAAAATCGTACGTCGATGCAAATCAATTTAAGAGTGTGGAACAGCTGGGGTTGTTCTTGAAGAATTTAATGCATAACGAGACTGAGTATTTGAGTTATTTTTGGTGGAAAAAACATTATCGCATTGAGACGAAAGTCAATGCTCACACCTTTTGTGATTTATGCAAGAAATTAAACGAGAACGATGTAAACAACCGAATTCAGTACTATAAGAGTATAAGTGATTGGTGGACCAAAGGAGTATGCATGAGATCAAAGATTGCGTTT
Protein: 392 (aa)
MKIIRKTSSVVLLILISTFVLALHLMNNYVFELSIARYKLIQLKTELTSDREKFFVLFWTKFFDIPYWNMGNETNGPEYLEAINCPVTNCVFTHNKDLINPVYYYDAIIFHAAQSWGIMDLPSLRSTHQLYVMASQESPAETKHNLSLDDYFFNITMTYRLDSDINWSYARVFDIATGRLIAPSKNAHWRQPEDVEDKNLHSVFGRKTKEVAWFVSHCKVFSKRDQLVKKLKQYVGIDVYGKCGDLECPRDKTLECSEKYKFYLSFENALCKDYVTEKLFNMMNGYVIPVVFNGADDMTNFLPPKSYVDANQFKSVEQLGLFLKNLMHNETEYLSYFWWKKHYRIETKVNAHTFCDLCKKLNENDVNNRIQYYKSISDWWTKGVCMRSKIAF
| Type | Start | End | Length |
| CDS |
39873 |
40282 |
410 |
| CDS |
40466 |
40644 |
179 |
| CDS |
40738 |
41324 |
587 |
| intron |
40283 |
40465 |
183 |
| intron |
40645 |
40737 |
93 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001660128 |
alpha(1,3)fucosyltransferase [Aedes aegypti] gb|EAT48746.1| alpha(1,3)fucosyltransferase [Aedes aegypti] |
4e-91 |
| InterPro |
IPR001503 |
Glycosyl transferase, family 10 |
|
| Gene Ontology(BP) |
GO:0006486 |
protein glycosylation |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0008417 |
fucosyltransferase activity |
|
| Pfam |
PF00852.14 |
Glycosyltransferase family 10 (fucosyltransferase) |
3.4e-87 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC008652 |
| A. gambiae |
AGAP000365 |
| M. musculus |
ENSMUSG00000036587 |
| H. sapiens |
ENSP00000302599 |
| C. quinquefasciatus |
CPIJ006298 |
| A. aegypti |
AAEL000244 |
| T. castaneum |
TC008651 |
| A. mellifera |
GB17182-PA |
| H. melpomene |
HMEL010690-PA |
| D. melanogaster |
FBgn0044872 |
| D. plexippus |
DPOGS205741PA |
| D. plexippus |
DPOGS205388PA |
| M. musculus |
ENSMUSG00000055373 |
| D. plexippus |
DPOGS205387PA |
| D. plexippus |
DPOGS213757PA |
| S. invicta |
SI2.2.0_03929 |
| C. quinquefasciatus |
CPIJ006301 |
| D. plexippus |
DPOGS205740PA |
| P. vanderplanki |
Pv.17419 |
| N. vitripennis |
NV13645-PA |
| H. sapiens |
ENSP00000318142 |
| H. melpomene |
HMEL010466-PA |
| P. vanderplanki |
Pv.15470 |
| B. mori |
BGIBMGA009243-TA |
| H. melpomene |
HMEL017887-PA |
| P. vanderplanki |
Pv.11627 |