MidgeBase gene description page [Pn.08313]
Outline
| Gene ID | Pn.08313 |
| Type | Protein coding gene |
| Scaffold | PnScaf7990 |
| Start | 11943 |
| End | 17218 |
| Direction | + |
Sequence
Transcript: 741 (bp)
ATGATGAAGACTTTAACAATGCCAACGGCACCGCCAACGACAGACGATAGCCTGCGAATATTGACAGACGACAAGACGATAAAGTCCACAAAAATTCAAGAGATGCTCGGCATAAACAGCGGCAGCGAGAATGTGAACAACAATTCAAACACAGTCACAGCGAGCAACCAAGTTCCGTTCTATTTCGGCATTTCGGAGATCCTCCCGACACTCTATCTGTGCGGCGCATGTGCTGTCGTCCAGCCCGAGACGCTCGAGGAGCTGCAAGTGAAATTTGTCGTGAACGCCACAGTTGAATTGCCCGACACGCCGCTGCCCGACAACCGACCCGAGTACTTGCGAATTCCCATCAAAGACACACGCGAATCCAATCTGATTGAGTTCTTCGATCAGGTCGCTGACGCCATCGAAAAGACACGACAAAGCGACGGCAAGAGCCTCGTGCATTGCGTGGCCGGCGTGTCTCGTTCCGCCTCGCTCGTCATCGCCTATCTCATGAAGTATTCCGACATGTCGCTGAAGCAAGCATTCCAGCATGTGCGCAGCATAAGGCCGCAGGTGCGACCGAATGTCGGCTTCTTCAAGCAGCTCATCGAGTACGAGCAGCGGCTCTTTGGCACAACGACAGTATCGATGGTTCACTGCTCGTCGCTCGGCGAGGAAATCCCCGATGTCTACGAGTCGGAGTACAAGGCGATGGAGCTTCTGTATCAGAAGTATCGGAGGAACTTTGCGCGACGA
Protein: 247 (aa)
MMKTLTMPTAPPTTDDSLRILTDDKTIKSTKIQEMLGINSGSENVNNNSNTVTASNQVPFYFGISEILPTLYLCGACAVVQPETLEELQVKFVVNATVELPDTPLPDNRPEYLRIPIKDTRESNLIEFFDQVADAIEKTRQSDGKSLVHCVAGVSRSASLVIAYLMKYSDMSLKQAFQHVRSIRPQVRPNVGFFKQLIEYEQRLFGTTTVSMVHCSSLGEEIPDVYESEYKAMELLYQKYRRNFARR
| Type | Start | End | Length |
| CDS |
11943 |
12106 |
164 |
| CDS |
16639 |
17215 |
577 |
| intron |
12107 |
16638 |
4532 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_316620 |
AGAP006593-PA [Anopheles gambiae str. PEST] gb|EAA11667.3| AGAP006593-PA [Anopheles gambiae str. PEST] |
9e-60 |
| InterPro |
IPR016130 |
Protein-tyrosine phosphatase, active site |
|
| InterPro |
IPR000387 |
Protein-tyrosine/Dual-specificity phosphatase |
|
| InterPro |
IPR024950 |
Dual specificity phosphatase |
|
| InterPro |
IPR003595 |
Protein-tyrosine phosphatase, catalytic |
|
| InterPro |
IPR000340 |
Dual specificity phosphatase, catalytic domain |
|
| InterPro |
IPR020422 |
Dual specificity phosphatase, subgroup, catalytic domain |
|
| Gene Ontology(BP) |
GO:0006470 |
protein dephosphorylation |
|
| Gene Ontology(BP) |
GO:0016311 |
dephosphorylation |
|
| Gene Ontology(MF) |
GO:0008138 |
protein tyrosine/serine/threonine phosphatase activity |
|
| Gene Ontology(MF) |
GO:0004725 |
protein tyrosine phosphatase activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF00102.22 |
Protein-tyrosine phosphatase |
1.9e-05 |
| Pfam |
PF04179.7 |
Initiator tRNA phosphoribosyl transferase |
0.0057 |
| Pfam |
PF05706.7 |
Cyclin-dependent kinase inhibitor 3 (CDKN3) |
0.11 |
| Pfam |
PF00782.15 |
Dual specificity phosphatase, catalytic domain |
7.2e-37 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL004251 |
| H. sapiens |
ENSP00000377910 |
| M. musculus |
ENSMUSG00000025043 |
| P. humanus |
PHUM601600-PA |
| B. mori |
BGIBMGA010855-TA |
| H. sapiens |
ENSP00000377912 |
| D. melanogaster |
FBgn0039742 |
| A. gambiae |
AGAP006593 |
| P. vanderplanki |
Pv.12046 |
| A. aegypti |
AAEL014391 |
| H. sapiens |
ENSP00000466299 |
| M. musculus |
ENSMUSG00000018648 |
| D. plexippus |
DPOGS211396PA |
| H. melpomene |
HMEL007565-PA |
| T. castaneum |
TC010951 |
| C. quinquefasciatus |
CPIJ007427 |