MidgeBase gene description page [Pn.08167]
Outline
| Gene ID | Pn.08167 |
| Type | Protein coding gene |
| Scaffold | PnScaf7825 |
| Start | 53870 |
| End | 54569 |
| Direction | + |
Sequence
Transcript: 561 (bp)
ATGTCCCGAGTATTGACGTTCGTCACAGGAAATGCCAAAAAGTTGGAGGAAATCAAAGCCATTCTTGGTCAGAATTTTCCTCTAAAAATCGAGAGCCAGAAAATTGACCTGCCGGAACTTCAAGGCGAAATTGACGAGATATCGATTCAGAAGGCGAAGGAGGCAGCAAAGCATGTCAAAGGACCGGTGGTAGTCGAGGATACGAGCTTGTGCTTCAACGCTCTGAACTCGCTTCCCGGTCCTTACATCAAATGGTTCTTGGACAAACTTGGACCCGACAATCTGCCGAAGCTCTTGGACGGGTTCGAAGACAAGTCGGCGCAAGCAGTGTGCACGTTGGCCTTTGCAAGGGACGAGAACTCGGAAGTCATATTGTTCAAGGGAATCACGGACGGCACAATAGTTACGCCGCGAGGACCACGCGACTTCGGATGGGATCCCATCTTTCAGCCAGTCGGCTACGAGAAGACTTACGCGGAGCTCCCGAAAGAAATGAAGAATGAAATCTCCCACCGTTACCGTGCCTTGGACAAGCTCCGCGATTACTTCACAAAAGAGAAC
Protein: 187 (aa)
MSRVLTFVTGNAKKLEEIKAILGQNFPLKIESQKIDLPELQGEIDEISIQKAKEAAKHVKGPVVVEDTSLCFNALNSLPGPYIKWFLDKLGPDNLPKLLDGFEDKSAQAVCTLAFARDENSEVILFKGITDGTIVTPRGPRDFGWDPIFQPVGYEKTYAELPKEMKNEISHRYRALDKLRDYFTKEN
| Type | Start | End | Length |
| CDS |
53870 |
53993 |
124 |
| CDS |
54066 |
54195 |
130 |
| CDS |
54260 |
54566 |
307 |
| intron |
53994 |
54065 |
72 |
| intron |
54196 |
54259 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001870361 |
inosine triphosphate pyrophosphatase [Culex quinquefasciatus] sp|B0XL39.1|ITPA_CULQU RecName: Full=Inosine triphosphate pyrophosphatase; Short=ITPase; Short=Inosine triphosphatase; AltName: Full=Non-canonical purine NTP pyrophosphatase; AltName: Full=Non-standard purine NTP pyrophosphatase; AltName: Full=Nucleoside-triphosphate diphosphatase; AltName: Full=Nucleoside-triphosphate pyrophosphatase; Short=NTPase gb|EDS33297.1| inosine triphosphate pyrophosphatase [Culex quinquefasciatus] |
1e-74 |
| InterPro |
IPR002637 |
Ham1-like protein |
|
| Gene Ontology(MF) |
GO:0016787 |
hydrolase activity |
|
| Pfam |
PF01725.11 |
Ham1 family |
5.9e-57 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB17688-PA |
| D. melanogaster |
FBgn0031663 |
| P. vanderplanki |
Pv.11212 |
| A. aegypti |
AAEL008605 |
| T. castaneum |
TC014054 |
| M. musculus |
ENSMUSG00000074797 |
| C. quinquefasciatus |
CPIJ019949 |
| H. melpomene |
HMEL011410-PA |
| P. humanus |
PHUM462900-PA |
| A. gambiae |
AGAP008374 |
| C. quinquefasciatus |
CPIJ801676 |
| S. invicta |
SI2.2.0_15326 |
| H. sapiens |
ENSP00000413282 |
| H. sapiens |
ENSP00000369456 |
| N. vitripennis |
NV10747-PA |
| B. mori |
BGIBMGA006159-TA |
| D. plexippus |
DPOGS214108PA |