MidgeBase gene description page [Pn.08127]
Outline
| Gene ID | Pn.08127 |
| Type | Protein coding gene |
| Scaffold | PnScaf7801 |
| Start | 49618 |
| End | 54672 |
| Direction | + |
Sequence
Transcript: 1605 (bp)
ATGCAAACAACTGAGGAAGGCGTTCAACAGACCGAACTAAAGTCGAGTCCCAACAATCCATTCAGAAATCCACAACCGCAGCAATTACCACAACAGCACTCAATTTATCCCCAGCAATATCAGAGCGCCAGCATCGATAGTACGGGTGGAAAGGAGAACAACAACGACTTCGCAACATCATGGAACAAATTCAAAGTGTGGATGATTCACTGGCGCGGCTCGCGGCAGCTCGTGCTAGTTATCGTTGCCATTGCTTTACTGTTGGACAACATGCTTCTTACCGTCGTCGTTCCTATCATACCTGAATTCCTTTATGACATAAGACATCCGGACGCGCCGCTCTCTAGCTTCCCCCGATCACCGCCGCCAATCGAATCGACGCCAAACTACGACAATGACGGATCTGACTCCACCACTGCCGGTTACGAAAATTCAAGCTGGTATGCCGAGCGAGAAGAGCGCCACAAGGAGCTGGTGGACGAGACTGCAGAGGTCGGTCTGATGTTTGCCTCGAAAGCCTTTGTTCAACTTCTATCGAATCCGTTTGTTGGGCCATTAACACACAAAATCGGCTACAGCATTCCAATGTTTGCAGGATTTGTCATCATGTTCTTATCAACCCTAATATTTGCTTTCGGTCGGACGTATCCCGTTCTGTTCATTGCGCGTGCACTGCAGGGCATCGGCTCTTCGTGCTCCTCTGTTTCGGGAATGGGAATGCTCGCTGATCGCTACACTGATGACAAGGAACGCGGCAATGCTATGGGAATCGCTCTCGGAGGTCTTGCGTTGGGCGTTCTCATCGGCCCACCCTTCGGTGGTTTCATGTATGAGTTCGTCGGAAAAACGGCACCCTTTCTGGTTCTCTCGATTCTGGCTCTCGGCGACGGCATGCTCCAACTCTTCATGCTGCAACCATCTGTGGCTCGATCGGAAGCAGAAGCACCGTCGTTGAAGGCTCTCGTCATGGATCCGTACATCTTGATCGCTGCGGGTGCCATAACATTTGCGAACATGGGAATTGCGATGCTCGAACCGTCGTTGCCGATCTGGATGATGGACCACATGGATGCATCGCGTTGGGAGCAAGGAGTCACCTTCCTGCCGGCCTCGATAAGCTACCTGATCGGAACGAATCTCTTTGGACCGCTTGGACACAAGATCGGACGATGGCGGGCTGCTTTGATTGGTCTCGTCGTTATCGGCGCATGCCTGATTGCCATTCCATCGGCGACGGCGATCTATCACTTGATCATACCAAATGCAGGCCTGGGATTCGCGATAGGAATGGTTGACTCATGTATGATGCCCGAGCTCGGCTACTTGGTGGACATTCGCCATTCTGCCGTCTACGGAAGCGTCTATGCGCTGGGAGACGTGGCATTTTGCCTCGGCTTCGCCGTCGGACCTGCATTAAGTGGAACACTGGTAAAGAACATTGGATTCGAGTGGATGATGTTTGGAATTGGAATTTTATGTTTTGTTTATGCACCGCTATTGCTTCTTTTGAAAGCACCGCCGACAAAGGAGGAGAAAAAGCAATTGATAACCGGAGACCGGTCATCGGTGAGATACGTTGCTTATCAAAATGACGAAGATGAAGAG
Protein: 535 (aa)
MQTTEEGVQQTELKSSPNNPFRNPQPQQLPQQHSIYPQQYQSASIDSTGGKENNNDFATSWNKFKVWMIHWRGSRQLVLVIVAIALLLDNMLLTVVVPIIPEFLYDIRHPDAPLSSFPRSPPPIESTPNYDNDGSDSTTAGYENSSWYAEREERHKELVDETAEVGLMFASKAFVQLLSNPFVGPLTHKIGYSIPMFAGFVIMFLSTLIFAFGRTYPVLFIARALQGIGSSCSSVSGMGMLADRYTDDKERGNAMGIALGGLALGVLIGPPFGGFMYEFVGKTAPFLVLSILALGDGMLQLFMLQPSVARSEAEAPSLKALVMDPYILIAAGAITFANMGIAMLEPSLPIWMMDHMDASRWEQGVTFLPASISYLIGTNLFGPLGHKIGRWRAALIGLVVIGACLIAIPSATAIYHLIIPNAGLGFAIGMVDSCMMPELGYLVDIRHSAVYGSVYALGDVAFCLGFAVGPALSGTLVKNIGFEWMMFGIGILCFVYAPLLLLLKAPPTKEEKKQLITGDRSSVRYVAYQNDEDEE
| Type | Start | End | Length |
| CDS |
49618 |
49906 |
289 |
| CDS |
52262 |
52399 |
138 |
| CDS |
52457 |
52595 |
139 |
| CDS |
52675 |
52686 |
12 |
| CDS |
52764 |
52810 |
47 |
| CDS |
52882 |
53061 |
180 |
| CDS |
53419 |
53834 |
416 |
| CDS |
53897 |
54093 |
197 |
| CDS |
54197 |
54317 |
121 |
| CDS |
54604 |
54669 |
66 |
| intron |
49907 |
52261 |
2355 |
| intron |
52400 |
52456 |
57 |
| intron |
52596 |
52674 |
79 |
| intron |
52687 |
52763 |
77 |
| intron |
52811 |
52881 |
71 |
| intron |
53062 |
53418 |
357 |
| intron |
53835 |
53896 |
62 |
| intron |
54094 |
54196 |
103 |
| intron |
54318 |
54603 |
286 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_313775 |
AGAP004476-PA [Anopheles gambiae str. PEST] gb|EAA09208.4| AGAP004476-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR020846 |
Major facilitator superfamily domain |
|
| InterPro |
IPR011701 |
Major facilitator superfamily |
|
| InterPro |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF05977.8 |
Transmembrane secretion effector |
0.00067 |
| Pfam |
PF01306.14 |
LacY proton/sugar symporter |
0.07 |
| Pfam |
PF00083.19 |
Sugar (and other) transporter |
8.2e-09 |
| Pfam |
PF07690.11 |
Major Facilitator Superfamily |
2.6e-47 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000428001 |
| B. mori |
BGIBMGA012148-TA |
| H. sapiens |
ENSP00000276373 |
| H. melpomene |
HMEL014811-PA |
| M. musculus |
ENSMUSG00000036330 |
| D. plexippus |
DPOGS215029PA |
| T. castaneum |
TC004499 |
| H. sapiens |
ENSP00000387549 |
| D. melanogaster |
FBgn0260964 |
| H. sapiens |
ENSP00000298472 |
| A. aegypti |
AAEL008816 |
| N. vitripennis |
NV10514-PA |
| A. mellifera |
GB13781-PA |
| H. sapiens |
ENSP00000429664 |
| H. sapiens |
ENSP00000371021 |
| H. sapiens |
ENSP00000265808 |
| A. gambiae |
AGAP004476 |
| H. sapiens |
ENSP00000413361 |
| P. humanus |
PHUM003180-PA |
| M. musculus |
ENSMUSG00000025094 |
| C. quinquefasciatus |
CPIJ007766 |
| P. vanderplanki |
Pv.01281 |