MidgeBase gene description page [Pn.08118]

Outline

Link to gbrowse

Gene ID Pn.08118
Type Protein coding gene
Scaffold PnScaf7788
Start 39
End 2392
Direction +

Sequence

Transcript: 1635 (bp)

 ATGGACATGGACGAGATCGACCGGCAGACGGTGCTCACGCGCTGCAAGGAGATCCTGCACGTCGGCTACAAGTTCGGCTTCGAGTACCACAAGGATCTGTCGAAACTGTTTGAGACGGCGTCGGCGCCGTCGCGCAACTCGCGCTGCGAGCAGAGCCTCGCGAAGGCGATCGTCGGCTTCGCCAAGTGCTGGATGACCTTCGTGATGGAGCGCTGCGAGCGCGGCCGCGGGCTGAGGCCGCGCTGGGCCGCCACCGGCCTCGAGTTCCTCATCATCGCGTGCGATCCGTTCAACACCGAGCAAATCGACGACAAGGACTTCGACGAGCTGAAGAGCTCGATGGACCGCTGCATTTCGCACGTGATCGGCAGCATTCACGAGCCGGAGCGAGTACGAAAGTCGCCGCGCTCGCGGAAGTCCTCGCCGGCACCAAGACGACGGACGCCGACCCGATCGTCGATCTCGTACACGCCCACCGCCCAGAAAATCCTCCAGCAGCAGATCAGCCTGCAGGTGGACAAGACGCGCCTCACGCCCAGCCCCGACCCGCGTGACTACCCCGCCGAGTTCCTGCGCAAGCAGACCTCGTACGAGAACATGAACGACGTGAGCGTCAAGGTGCCGCAGAGCCCGAGTCCCGAGCTGCGGCAAGTGCGGATCCGCGACGCCGTCAACCGGCTGGACCTGCAGCTGGAGAACAAGCTGCGCGAGAAGAACCTGATCGGGAACGTGAAGGAGTTGAGCTCGTGCGACAAGGTCGTGATCCGGGCGCGCAGCGTGAACTTCAGCTGGCACCGGGGCATCAAGATCGGCCAGGGCCGGTTCGGGAAGGTGTACACGGCCGTCAACAACTCGAATGGCGAGCTGATGGCGATGAAGGAAATCGTGATACAGGCGGGCGAGACGGGCACGATCAAGAGCGTCGCCGAGGAGCTGAAAATTTTCGAGGGCATTCATCACAAGCACTTGGTCAAATATTATGGCGTCGAGATACACCGGGAAGAGCTGCTCATTTTCATGGAGCTGTGTGCCGAGGGAACGCTCGAGTCGCTGTGCGAAATGTCGGGCGGCTTGCACGAGGCACTCATTCGACGCTACACCACGCAACTGTTGCTCGCCGTCGAGGAACTTCACAAGAACGGCATCGTGCATCGCGATATCAAGTGTGCCAACATCTTTCTCACCAACGAGGGCAACTGCCTGAAGCTCGGCGACTTCGGATCGGCCATCAAGATCAAGTGCACCACCACCATGCCCGGCGAGCTGAAAGGTTATGTCGGCACCCAGGCTTACATGGCGCCAGAAGTGTTTACGAAGAATAATACGGAAGGTCATGGTCGAGCGGCGGACATCTGGTCGGTCGGCTGCTGTGTCATTGAGATGGCTTCGGGAAAGCGTCCGTGGAGTCAGTTCGAGAGCAATTTCCAAATCATGTTCAAAGTAGGCATGGGCGAGGTGCCCGACATTCCAACCACCCTCTCCGAGGAGGGCATCGACTTCGTGGAGTGCTGTCTGATTCACGATCCCAAGGATCGGTGGACCGCGACTGAGTTGCTGCAACATTCAAACTTTTGTAAAGTTTCGTTAGACAACGACTGTAACTGTGATGATGATAAAACGTTAAAGAAGGCGAAC 

Protein: 545 (aa)

 MDMDEIDRQTVLTRCKEILHVGYKFGFEYHKDLSKLFETASAPSRNSRCEQSLAKAIVGFAKCWMTFVMERCERGRGLRPRWAATGLEFLIIACDPFNTEQIDDKDFDELKSSMDRCISHVIGSIHEPERVRKSPRSRKSSPAPRRRTPTRSSISYTPTAQKILQQQISLQVDKTRLTPSPDPRDYPAEFLRKQTSYENMNDVSVKVPQSPSPELRQVRIRDAVNRLDLQLENKLREKNLIGNVKELSSCDKVVIRARSVNFSWHRGIKIGQGRFGKVYTAVNNSNGELMAMKEIVIQAGETGTIKSVAEELKIFEGIHHKHLVKYYGVEIHREELLIFMELCAEGTLESLCEMSGGLHEALIRRYTTQLLLAVEELHKNGIVHRDIKCANIFLTNEGNCLKLGDFGSAIKIKCTTTMPGELKGYVGTQAYMAPEVFTKNNTEGHGRAADIWSVGCCVIEMASGKRPWSQFESNFQIMFKVGMGEVPDIPTTLSEEGIDFVECCLIHDPKDRWTATELLQHSNFCKVSLDNDCNCDDDKTLKKAN 
Type Start End Length
CDS 39 1037 999
CDS 1118 1387 270
CDS 1797 1833 37
CDS 1902 1990 89
CDS 2062 2244 183
CDS 2333 2389 57
intron 1038 1117 80
intron 1388 1796 409
intron 1834 1901 68
intron 1991 2061 71
intron 2245 2332 88

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr XP_001660852 mitogen activated protein kinase kinase kinase 4, mapkkk4, mekk4 [Aedes aegypti] gb|EAT37548.1| mitogen activated protein kinase kinase kinase 4, mapkkk4, mekk4 [Aedes aegypti] 0.0
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR002290 Serine/threonine- / dual-specificity protein kinase, catalytic domain
InterPro IPR020635 Tyrosine-protein kinase, catalytic domain
InterPro IPR008271 Serine/threonine-protein kinase, active site
InterPro IPR011009 Protein kinase-like domain
Gene Ontology(BP) GO:0006468 protein phosphorylation
Gene Ontology(MF) GO:0004713 protein tyrosine kinase activity
Gene Ontology(MF) GO:0004674 protein serine/threonine kinase activity
Gene Ontology(MF) GO:0005524 ATP binding
Gene Ontology(MF) GO:0004672 protein kinase activity
Gene Ontology(MF) GO:0016772 transferase activity, transferring phosphorus-containing groups
Pfam PF00069.20 Protein kinase domain 1e-62
Pfam PF06293.9 Lipopolysaccharide kinase (Kdo/WaaP) family 0.035
Pfam PF07714.12 Protein tyrosine kinase 1e-38

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID
Pn.05564

Orthologous genes

Species Gene ID
H. sapiens ENSP00000355887
D. plexippus DPOGS213875PA
N. vitripennis NV17884-PA
A. aegypti AAEL010466
H. sapiens ENSP00000297332
H. melpomene HMEL003473-PA
C. quinquefasciatus CPIJ001610
N. vitripennis NV31512-PA
H. sapiens ENSP00000445018
A. gambiae AGAP002371
H. sapiens ENSP00000375986
T. castaneum TC000847
P. vanderplanki Pv.05311
P. vanderplanki Pv.15947
D. melanogaster FBgn0024329
H. sapiens ENSP00000355886
H. sapiens ENSP00000446303
S. invicta SI2.2.0_01144
A. mellifera GB11819-PA
B. mori BGIBMGA013442-TA
M. musculus ENSMUSG00000014426