MidgeBase gene description page [Pn.08023]
Outline
| Gene ID | Pn.08023 |
| Type | Protein coding gene |
| Scaffold | PnScaf7562 |
| Start | 33436 |
| End | 34069 |
| Direction | + |
Sequence
Transcript: 372 (bp)
ATGGCTCTTCACTCTGCTATTAAAGGGAAGCTCCTGTCCGTCATCGGAGATGAGGACACTTGCGTTGGCTTCCTGCTCGGCGGAATCGGAGAGATCAACAAAAATCGCCATCCAAACTTCATGGTTGTCGACAAGAACACAGCCGTGAGCGAGATCGAGGACTGCTTCAAGAGATTCGTCCGTCGCGATGACATCGATATCATTCTCATCAATCAGAACTGCGCTGAGCTGATTCGCCATGTCATTGATGCGCACACATCGCCGATTCCTGCGATCCTTGAAATTCCGTCGAAAGATCATCCATACGACCCGAGCAAGGACTCGATTCTGCGTAGAGCCAAGGGCATGTTCTCAGCCGAGGACTTGGTTCGC
Protein: 124 (aa)
MALHSAIKGKLLSVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTAVSEIEDCFKRFVRRDDIDIILINQNCAELIRHVIDAHTSPIPAILEIPSKDHPYDPSKDSILRRAKGMFSAEDLVR
| Type | Start | End | Length |
| CDS |
33436 |
33489 |
54 |
| CDS |
33582 |
33663 |
82 |
| CDS |
33762 |
33920 |
159 |
| CDS |
33990 |
34066 |
77 |
| intron |
33490 |
33581 |
92 |
| intron |
33664 |
33761 |
98 |
| intron |
33921 |
33989 |
69 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001960470 |
GF13376 [Drosophila ananassae] gb|EDV37292.1| GF13376 [Drosophila ananassae] |
6e-62 |
| InterPro |
IPR005772 |
ATPase, V1 complex, subunit F, eukaryotic |
|
| InterPro |
IPR008218 |
ATPase, V1/A1 complex, subunit F |
|
| Gene Ontology(BP) |
GO:0015991 |
ATP hydrolysis coupled proton transport |
|
| Gene Ontology(CC) |
GO:0033178 |
proton-transporting two-sector ATPase complex, catalytic domain |
|
| Gene Ontology(CC) |
GO:0033180 |
proton-transporting V-type ATPase, V1 domain |
|
| Gene Ontology(MF) |
GO:0046933 |
hydrogen ion transporting ATP synthase activity, rotational mechanism |
|
| Gene Ontology(MF) |
GO:0046961 |
proton-transporting ATPase activity, rotational mechanism |
|
| Pfam |
PF01990.12 |
ATP synthase (F/14-kDa) subunit |
1e-29 |
| Pfam |
PF07199.6 |
Protein of unknown function (DUF1411) |
0.14 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000249289 |
| B. mori |
BGIBMGA008011-TA |
| A. gambiae |
AGAP002473 |
| N. vitripennis |
NV14793-PA |
| P. vanderplanki |
Pv.11752 |
| H. sapiens |
ENSP00000417378 |
| M. musculus |
ENSMUSG00000004285 |
| H. melpomene |
HMEL004339-PA |
| A. mellifera |
GB18107-PA |
| C. quinquefasciatus |
CPIJ016432 |
| D. plexippus |
DPOGS209786PA |
| T. castaneum |
TC000874 |
| A. aegypti |
AAEL002464 |
| D. melanogaster |
FBgn0262512 |
| S. invicta |
SI2.2.0_09212 |
| P. humanus |
PHUM390990-PA |