MidgeBase gene description page [Pn.07958]
Outline
| Gene ID | Pn.07958 |
| Type | Protein coding gene |
| Scaffold | PnScaf7510 |
| Start | 12490 |
| End | 17428 |
| Direction | + |
Sequence
Transcript: 3627 (bp)
ATGATGCACAGTAATATTTTGTTTGATAGGGACGCGGGCTACAACACCGGACGCGACAGTGCCCAGCGCAAAAACCGCATGCGACGCATGGAGGAGTTGAGTCACTCGCTGGACGACGGACTTAACAACCTTCCCGAGGAGTCGTACAACAAGCGTCACAGCAACAGCACCACGGCCATGCGACGCAACGCCATCGCGTCGTACGACGACGAGGACGAAGACGACGACTACGGCGACGACGAGTTCATGGACGACTACTACTACAACAACAACAACGGCGGTGGCGGCAACAACGGCGGCAAGTCCTCGTTCGACGGCCGGCCGCGCAGCTACAACGAAAAGTATTCAAATTCCTACATGTACGACGACTACGACGGCGGCGGCTTTGCTCGCAACCGCTACAGCCTCAACGAGCAGTCGGCGCCGAAGGGCCGCTACCAGCAGTCGCCGACGGCGCAGCAAAAATATTCCTCCCTCCGCAAACCGCAGCCGTCGCCGATGAGCGGCAAGCACATCCTCTTCAATGACGAGGACGACGTTCGCTACATGAACGACCGCTCGAAAAATTCCGCGGTGGCGGCAGCAGCGACGTCGTCGGCGTCGTCAGCGGCGAACTCGAAAAAGTCGTCAAACACGATGAAAAAGGAGGCGCAGTCGACGCAAGATCGCGCGCGAAGGGAGAAAGAAGTGCCGGCGAGGAGCGGCAACAAGAAGAGCCAGTCGCAGGACGACGCCTCAGCCAAGCTCGACAAATCCTCGTCGCTGCAGGTGATGAAGGCGAAGCTGAAGATCCACAACATGTCGAACGACGACTCGGTCATCAACCAGCGCAGCAGCCCGATGCTGAAGTCGCCGTCGCTGTTCCATCGGCATCACTCGGTGGAGGCCAAATTGCCGTCGCACCATGCCGATCGCAGCAATATGTCGCCCACCATAATGGAGGAGATTGAGTTCGAGATGCAGGATGTCGAGACGGAGGGCGAGCGCGAGATGGCAGCGGCGACGGCGGCGGAAGAGGAGGAAATTAGGAGAAATGAAGACGAGCGTCAGCAGGCGGCGACGGGAGGTGGGAAAGAGGCGAAGAAGAGCGGCAAGGAGAAGGCGAAGGAGAAAGAGAAGGAGAAGGACAAGAAGGGGAACTCGGTGCCGTCGACGCCGACGACGAAAAAGTCGCTGAAGGCGCATTTGTCGAACCACAAGAAGCTCTTTAAAGTACCTGACATTGATCTCAACAATTTGAAGTTTTCGTGCTTCTTCAGCAGTCACAAGAACATTGCTGCGCTGAAGGGCAAGAAGGACGACAGCACGAGCAAGAGCGCCGAGGCACTTAACGCTCCACCTGTCGCCGCCGCCGCCGAACCTTCGTCATCATCCAAATCCTCCACACCCAAGTCATCGCCGACGACAAAGAGTCCTCCGTCATCGGCCATGAAGACGCCGCCCGCGTCGCCCAAGAAGCCACTCAAAGGCGACGCCGTCGCGCAAAGGAGCGAGCGACTCGAGCAGGAGAAATTCACGAAAATTCCGCCAAACGAAGGCGCCGCGAGTCGGGCAGCGGTCGAGTACTTCACTGACACGGACAATTTTAGTGACGCGGAATTTGAGTCACAGGCCATGAAAGTGGTGCGAACGGTGGGCCAGGCGTTCGAGGTGTGCCACAAGCTGTCGATGCAGAAGAAGCAGGACAACAACGACGACAACTCGGAGATCGCGTCCGATCTCAACGAGTCGGACATCCAGAACCTGAGCGACTTCGATGAGCCGAAGAAGAGTGAGTTTCACAGCATTCCGCAGCAAAAAGACACAAAGAAAAGACTTCAATTTTCCTCTCTCACGCACGCAGCCGCCTTGGATGAGACGCCGTCAATGCACGATGTATCGCAAAAACTGCAGCGGCCGACGCAGCTCGAGAACCTCACGCAGCCTCTGAAGAGCTTAATCACGCCGTCGTCGCCAAATAAAGTGCTAACGCCCTCGGACGACAGCAACAAGGAAAATGAACGCGAAATTCAATTACTGCGAGAGCAATTATCGCAGCAGAACCAGCAAACGAAGCAGGCACTCGCACAGCTCATTCTGGTGAGAGAGCAGCTGCTGACCGAGACAAATGCACGAATCGAAGCTCAGGCCCGAATTCAACAACTCCTACAGCAAAACAGGGAACTGCTGGAGCACATAGCGTCGCTAAGCGGATTAAACGAGTCCGACAGGACGGGATTGACCTCGGCTAACATCGGCATGGCGCCGCAGTCGCAACTTCCATTCTATCTTCAGACGCTTTCGATGCTCGGCGCGACGTCGCCGGCAAACATCCTCTCGTCCGCCTCGCTCTTGTCGCAGAAGCCAAACGACTTGCTCCACAATGAGGACATCAAGAACAACAACAACAATAACAACAGCAACAACAATAGCAACAGCAGCCCGCTGAAGGCAAATCAGCCGACTGTCAACGGATTTAGTCTTGAGAATCTGCAGATGCTGCAGACCTACAATCAGCTGCAGAAGCTGACGATGCCGCAGCCGCACCAGGCGCACCAGGACCTCTACCAGCTCAACAATGACCTGCTCAATCGCCTCAAGAACATCAACCTGGGCTACGCGATGCAGGCGGCCGCGGCGGCGTCGAGTCCGCTGCCAACACCGGTGAGCGCACCATCATTTTCACCCAGTCCAACCGCCACCGCCGGCCAAGCTTTTCCAAACTTCCCTTCAGACTCAAACTTCTTGTTCACTAATGCCGCCGCTCAAAATTTATTAAACAACAATAGTAACAGTAATAATAATAATAATAACATCAACAACAATAATAGCATCATCAACAACAGTCACAGTAACAGTTGCAATGTGGCGGCCTCCTCCCCGATCGGCACACTCAACCGCAGCTCATCCACATATTCCACAATCAGCCCCATCGGCGACAGCTTCGACCGATCGCTCGACAACATCAACAACAACCACAACATTAACTCAAGCAATGAGTCGCCGTTCATTAAGCCGTTGTCGCAAGTCGGCTGTCACACGACGCTCGACACCGAGGGCAAGGTGAAGGTGCTTGTGCCGATCGACCACTCGCACTACGATATGCGTGCGCGCAGCAGTGAGCCGTACGACACGAGGCAGAGCCACGACGGAACGCTCCAGCGACCCACACAGCAGCAGCCGATCCTCACGCCGATTCTCAGCCGTGGCGAGAAGAAAAACCACTCGGTGACGCTGAAGGTCACTGACGAGGCCGGCAACGTGACGAACCCGCGGAAGCTGCCGGCACAGCCGAGCTTCATCACGCGCAGCACGAGCGAGAAAGTCCCCAACCGCAGCCAAATGATGAGCCAGATGACGTCGACAGCGAAGGTGGCCCGATGGTTCAATCAACTCCAGTCATATCCCGCCGCGTCGCTTTCGCGTCCCGAGAGTGGTTTCGTCTCGACTTCGGAGTCTCGCGCGTCCGAGAAGAATCTTAAGAAGTCGGATGTCGACGATCACGACGGTAAAAATCTCTTCCCCAACAACGACGACTTTGCCGACGAATATCTTCTGGTCGAGGGCACTGCCAGTCTGTGGAGCAAACTCAGTGTTCGAAAGCGGAAGAAGCTGCTGGGCCTGAAGCTCGGAAAAGTTACAACGTTT
Protein: 1209 (aa)
MMHSNILFDRDAGYNTGRDSAQRKNRMRRMEELSHSLDDGLNNLPEESYNKRHSNSTTAMRRNAIASYDDEDEDDDYGDDEFMDDYYYNNNNGGGGNNGGKSSFDGRPRSYNEKYSNSYMYDDYDGGGFARNRYSLNEQSAPKGRYQQSPTAQQKYSSLRKPQPSPMSGKHILFNDEDDVRYMNDRSKNSAVAAAATSSASSAANSKKSSNTMKKEAQSTQDRARREKEVPARSGNKKSQSQDDASAKLDKSSSLQVMKAKLKIHNMSNDDSVINQRSSPMLKSPSLFHRHHSVEAKLPSHHADRSNMSPTIMEEIEFEMQDVETEGEREMAAATAAEEEEIRRNEDERQQAATGGGKEAKKSGKEKAKEKEKEKDKKGNSVPSTPTTKKSLKAHLSNHKKLFKVPDIDLNNLKFSCFFSSHKNIAALKGKKDDSTSKSAEALNAPPVAAAAEPSSSSKSSTPKSSPTTKSPPSSAMKTPPASPKKPLKGDAVAQRSERLEQEKFTKIPPNEGAASRAAVEYFTDTDNFSDAEFESQAMKVVRTVGQAFEVCHKLSMQKKQDNNDDNSEIASDLNESDIQNLSDFDEPKKSEFHSIPQQKDTKKRLQFSSLTHAAALDETPSMHDVSQKLQRPTQLENLTQPLKSLITPSSPNKVLTPSDDSNKENEREIQLLREQLSQQNQQTKQALAQLILVREQLLTETNARIEAQARIQQLLQQNRELLEHIASLSGLNESDRTGLTSANIGMAPQSQLPFYLQTLSMLGATSPANILSSASLLSQKPNDLLHNEDIKNNNNNNNSNNNSNSSPLKANQPTVNGFSLENLQMLQTYNQLQKLTMPQPHQAHQDLYQLNNDLLNRLKNINLGYAMQAAAAASSPLPTPVSAPSFSPSPTATAGQAFPNFPSDSNFLFTNAAAQNLLNNNSNSNNNNNNINNNNSIINNSHSNSCNVAASSPIGTLNRSSSTYSTISPIGDSFDRSLDNINNNHNINSSNESPFIKPLSQVGCHTTLDTEGKVKVLVPIDHSHYDMRARSSEPYDTRQSHDGTLQRPTQQQPILTPILSRGEKKNHSVTLKVTDEAGNVTNPRKLPAQPSFITRSTSEKVPNRSQMMSQMTSTAKVARWFNQLQSYPAASLSRPESGFVSTSESRASEKNLKKSDVDDHDGKNLFPNNDDFADEYLLVEGTASLWSKLSVRKRKKLLGLKLGKVTTF
| Type | Start | End | Length |
| CDS |
12490 |
14094 |
1605 |
| CDS |
14250 |
14615 |
366 |
| CDS |
14770 |
14925 |
156 |
| CDS |
14997 |
15119 |
123 |
| CDS |
15642 |
16724 |
1083 |
| CDS |
17132 |
17425 |
294 |
| intron |
14095 |
14249 |
155 |
| intron |
14616 |
14769 |
154 |
| intron |
14926 |
14996 |
71 |
| intron |
15120 |
15641 |
522 |
| intron |
16725 |
17131 |
407 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001650505 |
c-terminal pdz ligand of neuronal nitric oxide synthase protein [Aedes aegypti] gb|EAT43382.1| c-terminal pdz ligand of neuronal nitric oxide synthase protein [Aedes aegypti] |
5e-62 |
| Pfam |
PF00640.18 |
Phosphotyrosine interaction domain (PTB/PID) |
1 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000038473 |
| S. invicta |
SI2.2.0_02048 |
| C. quinquefasciatus |
CPIJ002054 |
| A. gambiae |
AGAP007627 |
| S. invicta |
SI2.2.0_08037 |
| H. sapiens |
ENSP00000355133 |
| P. vanderplanki |
Pv.06665 |
| N. vitripennis |
NV20755-PA |
| A. mellifera |
GB10113-PA |
| P. humanus |
PHUM020390-PA |
| H. sapiens |
ENSP00000396713 |
| H. sapiens |
ENSP00000431586 |
| B. mori |
BGIBMGA000651-TA |
| A. aegypti |
AAEL005206 |