MidgeBase gene description page [Pn.07879]
Outline
| Gene ID | Pn.07879 |
| Type | Protein coding gene |
| Scaffold | PnScaf7361 |
| Start | 4624 |
| End | 5171 |
| Direction | - |
Sequence
Transcript: 462 (bp)
ATGCCGGTGCTGGAGATTGACGGCAAGCAAGCCTTCCAGTCGGTGTCGATTTGCCGCTTCCTCGGCAAGAAGGTCGGCCTGTGTGGAAGCGACGACTTCGAGAATCTCGAGATCGACAGCGTCGTCGACACTTTTGTGGATTTCCGACTGAAAATCACGGCAGCAGCCTTCGGACCGGAGGACAAGAAGGCCGAAGCGATGAAGACGCTTAAGGAGGAAACGGCGCCGTTCTTCCTCTCGAAACTGAACGCCCTGGCTGAGGCCAACGGCGGCTACCTTGCGTGTAAAAAACTCACCTGGGCCGACATCTACTTCGCCTCCCTCAACGGAATCGTCCGCTACGTGTCGGTCGAAGGCGAGGACACGTGGTCGAAGTATCCGGCGCTCAAGAAAGTCGTCGAAAATGTTGAGGCCCTCGACGAGATCAAGAAGTGGATCGCCGAGCGACCGGCAACTGATTTT
Protein: 154 (aa)
MPVLEIDGKQAFQSVSICRFLGKKVGLCGSDDFENLEIDSVVDTFVDFRLKITAAAFGPEDKKAEAMKTLKEETAPFFLSKLNALAEANGGYLACKKLTWADIYFASLNGIVRYVSVEGEDTWSKYPALKKVVENVEALDEIKKWIAERPATDF
| Type | Start | End | Length |
| CDS |
4627 |
4937 |
311 |
| CDS |
5021 |
5171 |
151 |
| intron |
4938 |
5020 |
83 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR27737 |
hypothetical protein AND_05218 [Anopheles darlingi] |
3e-37 |
| InterPro |
IPR004046 |
Glutathione S-transferase, C-terminal |
|
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
0.00061 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
0.032 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
1.9e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.06993 |