MidgeBase gene description page [Pn.07811]
Outline
| Gene ID | Pn.07811 |
| Type | Protein coding gene |
| Scaffold | PnScaf7224 |
| Start | 2378 |
| End | 3043 |
| Direction | - |
Sequence
Transcript: 315 (bp)
ATGAATATTCACTTTTCTGCTGATTTTGATGCACAACTTGAGAAAGCTGGAGATCGATTGGTAGTTGTAGATTTCTTCGCAACATGGTGTGGTCCATGCAAAATGATTGCACCAAAACTCGAAGAATTTCAAAACACATATGTTGACAAAGTTGTCATCATTAAAGTTGATGTTGACGAATGTGAAGAAATCGCAGTGAAATACAACATTTCATCGATGCCAACGTTCGTATTCATTAAAAAGGGTCAGCAAATCGATAGCTTCTCGGGAGCAAATCCTGAAAAACTTGAAAAATACATCACTCAGCACTCAGTA
Protein: 105 (aa)
MNIHFSADFDAQLEKAGDRLVVVDFFATWCGPCKMIAPKLEEFQNTYVDKVVIIKVDVDECEEIAVKYNISSMPTFVFIKKGQQIDSFSGANPEKLEKYITQHSV
| Type | Start | End | Length |
| CDS |
2381 |
2530 |
150 |
| CDS |
2741 |
2887 |
147 |
| CDS |
3026 |
3043 |
18 |
| intron |
2531 |
2740 |
210 |
| intron |
2888 |
3025 |
138 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001861983 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS36322.1| conserved hypothetical protein [Culex quinquefasciatus] |
3e-37 |
| InterPro |
IPR005746 |
Thioredoxin |
|
| InterPro |
IPR013766 |
Thioredoxin domain |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR017937 |
Thioredoxin, conserved site |
|
| Gene Ontology(BP) |
GO:0006662 |
glycerol ether metabolic process |
|
| Gene Ontology(BP) |
GO:0045454 |
cell redox homeostasis |
|
| Gene Ontology(MF) |
GO:0015035 |
protein disulfide oxidoreductase activity |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Pfam |
PF01323.15 |
DSBA-like thioredoxin domain |
0.11 |
| Pfam |
PF13905.1 |
Thioredoxin-like |
3.1e-11 |
| Pfam |
PF13848.1 |
Thioredoxin-like domain |
0.029 |
| Pfam |
PF11948.3 |
Protein of unknown function (DUF3465) |
0.11 |
| Pfam |
PF13899.1 |
Thioredoxin-like |
2.5e-05 |
| Pfam |
PF07449.6 |
Hydrogenase-1 expression protein HyaE |
0.0013 |
| Pfam |
PF13728.1 |
F plasmid transfer operon protein |
0.0031 |
| Pfam |
PF00578.16 |
AhpC/TSA family |
1.7e-05 |
| Pfam |
PF08534.5 |
Redoxin |
5.8e-05 |
| Pfam |
PF02966.11 |
Mitosis protein DIM1 |
0.00081 |
| Pfam |
PF13098.1 |
Thioredoxin-like domain |
5.2e-10 |
| Pfam |
PF00085.15 |
Thioredoxin |
1.9e-33 |
| Pfam |
PF13462.1 |
Thioredoxin |
0.05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_04506 |
| B. mori |
BGIBMGA008120-TA |
| D. melanogaster |
FBgn0040070 |
| M. musculus |
ENSMUSG00000028367 |
| H. melpomene |
HMEL015667-PA |
| D. melanogaster |
FBgn0029752 |
| A. mellifera |
GB15855-PA |
| C. quinquefasciatus |
CPIJ012011 |
| D. plexippus |
DPOGS201640PA |
| A. gambiae |
AGAP009584 |
| P. vanderplanki |
Pv.07218 |
| P. humanus |
PHUM156960-PA |
| N. vitripennis |
NV13156-PA |
| H. sapiens |
ENSP00000363641 |
| H. melpomene |
HMEL015666-PA |
| T. castaneum |
TC015376 |
| A. aegypti |
AAEL010777 |