MidgeBase gene description page [Pn.07791]
Outline
| Gene ID | Pn.07791 |
| Type | Protein coding gene |
| Scaffold | PnScaf7184 |
| Start | 794 |
| End | 4164 |
| Direction | + |
Sequence
Transcript: 1440 (bp)
ATGGGGGAAAGCATTCCGGGCATCCAGAAGTACGAGCTCGACCCGGACAAGCGCAACGCTATGATCAAAATCACGGCCAATGGCTTCGTCATCATCCTGCAGGTGATTTTCCCGAGCGGCTACCCCCTCTCGTCGCCGCCCATCTTCGAATTCTGCCCGGGCACGACGCTCGACGAGAATCTCTCGCTGAAGCTCATGAAGGTGCTCAAGGACTCGTCCGCGAGTCGCGTCAAAAAGGGCAAGGCCTGCCTCGAGCACTGCCTGCGCGCGCTCGTCAACGACCTCAAGAAGGAGGCGGGCGGCGACAAGGCCAACTACCTGCGCCTCCAGTCGCCGCGTCTCGAGGGCGCGCTCTCGAAAGCCCTCTCCGACTCGCTCATTCCCTTCCCGAAGACGTCGGGCGTGCGCTTCAACGTGACCGGCATGCTCGTGACCTTTGCGCGCCCTTTCACGGCCAAGCGCTTCAGCCTCCGCAACCAGACGACGACGCCGCGCGCTTTGTCAGCGCTCTCTGGCGGTTACCTCGGAAATGTCAACGGTTCGAAACCCGTTTTCTACCCCTCGAAGGACATCGACCGGAAATCGGCAACCAGCGTCAGCATCTGCATCTACGATGCGTCTAAGCTGCTGATGGTGTCGCGCGAACTTGCCGAAAGCTACGTGATTGTGCCAACGAATTTGCCGCTGATGTGCAGACGCAACCGCGAGGTGGCCGAGGAGTTCGGCAGGGTTGACTTGGTGCAGACGTGGAGCATCGCCGAGACCATCGCTCAGGCGCTCGCGAGCAGCGACTTCGAGCTTAGCGACGACGAGATGTTCTCGAGTCCCAATCCCTTCGCAAAGACCTTCCTCGAGGCGCTAATAAATCACTACGCAAAACTCGGAGATGTACAGACTGCAGCGATGCTTTGTGTGACTTTCGGAAAGCATTATCAGGAGATATCATCGAGAACCTCTTCGTTTTCGACCAAATCTAATACCAGCCATTTACACGCACAACGATTACTCAAGCAAAGCGTCTCGCCCTACCACACGGTGACCGCCATGGACGTCAACTCGCAGGCCTCGATCAAGTACAACGCGTGGCTCCTCGCCCAGCACCTCAAGGGACAAACGCGCAGCAACTCGTGGTCGGACTCGCTCGACGACTTCCGCGTCAACGAAGTCAACCGCAGCATTCTGGGCGAGAGCAACCGGCACTTCTACGACTGCATAAAGAAGGCCTACGCCGACATCCTCTACTGCTACAACCAGCTGCCGTCGCGCGCGCAGGTCATGAAGTTCGTGTCGACGCCGGTCGCGATGTCGAGCACGGTCGAGTTTGTGACCGAGTGCCAGAGCTGCAAGAAAACCTCGAAGGGACCGTCCTGCGTGCACTGCAAGAAGTTCATGCTCTACTGTGCCTACTGTCAGCTGCCCATTCGAGGTGAGTCATGCGTT
Protein: 480 (aa)
MGESIPGIQKYELDPDKRNAMIKITANGFVIILQVIFPSGYPLSSPPIFEFCPGTTLDENLSLKLMKVLKDSSASRVKKGKACLEHCLRALVNDLKKEAGGDKANYLRLQSPRLEGALSKALSDSLIPFPKTSGVRFNVTGMLVTFARPFTAKRFSLRNQTTTPRALSALSGGYLGNVNGSKPVFYPSKDIDRKSATSVSICIYDASKLLMVSRELAESYVIVPTNLPLMCRRNREVAEEFGRVDLVQTWSIAETIAQALASSDFELSDDEMFSSPNPFAKTFLEALINHYAKLGDVQTAAMLCVTFGKHYQEISSRTSSFSTKSNTSHLHAQRLLKQSVSPYHTVTAMDVNSQASIKYNAWLLAQHLKGQTRSNSWSDSLDDFRVNEVNRSILGESNRHFYDCIKKAYADILYCYNQLPSRAQVMKFVSTPVAMSSTVEFVTECQSCKKTSKGPSCVHCKKFMLYCAYCQLPIRGESCV
| Type | Start | End | Length |
| CDS |
794 |
803 |
10 |
| CDS |
1174 |
2023 |
850 |
| CDS |
2833 |
2956 |
124 |
| CDS |
3263 |
3289 |
27 |
| CDS |
3733 |
4161 |
429 |
| intron |
804 |
1173 |
370 |
| intron |
2024 |
2832 |
809 |
| intron |
2957 |
3262 |
306 |
| intron |
3290 |
3732 |
443 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_317129 |
AGAP008331-PA [Anopheles gambiae str. PEST] gb|EAA12424.4| AGAP008331-PA [Anopheles gambiae str. PEST] |
1e-133 |
| InterPro |
IPR006575 |
RWD domain |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF05773.17 |
RWD domain |
0.00035 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000454382 |
| A. aegypti |
AAEL014534 |
| A. gambiae |
AGAP008331 |
| C. quinquefasciatus |
CPIJ010510 |
| D. plexippus |
DPOGS211143PA |
| M. musculus |
ENSMUSG00000031959 |
| H. sapiens |
ENSP00000262144 |
| B. mori |
BGIBMGA003015-TA |
| P. vanderplanki |
Pv.03047 |
| A. mellifera |
GB15221-PA |
| S. invicta |
SI2.2.0_11621 |
| D. melanogaster |
FBgn0032339 |
| A. aegypti |
AAEL013464 |
| H. melpomene |
HMEL017208-PA |
| N. vitripennis |
NV10090-PA |
| P. humanus |
PHUM509530-PA |
| T. castaneum |
TC014633 |