MidgeBase gene description page [Pn.07789]
Outline
| Gene ID | Pn.07789 |
| Type | Protein coding gene |
| Scaffold | PnScaf7175 |
| Start | 206969 |
| End | 209671 |
| Direction | + |
Sequence
Transcript: 1494 (bp)
ATGAGAATTCCAAAATTCTCGCTAAAACGATGCTTTATCATCGTAGTCGTACTGTGTGCCCTTCTAGTTTTTGTGATAAATTTCAGAGAGAAAGAAATATGGCACAACAACAAAGTTTCGGTTCTAACTGCTCACAACCAACAGCACCATCTGCAGCAGTCAACACATCCGAATTATGAAAATAGTAACGAAGTGAGAGCGGTCGTTCCTCCAGATAATAATAACATTTTCGAAAATCATGAAGTGCAGCCAATTTCAACTGCACGTCTGCCTTCCCAACATAGTATTAATGAAGAAATGATATATCAAGACATTAATGATGATGATGAGTCAATAATGTCGTCTCGTCCATGGTACTTCACTAATGGGGAACGATATCCAAAAGAAGCGAAAATAAATAAGAAGACGAAAAGACGGCTGGCTAAAATACAAGTTTGGGAGGACACGAGGAGTGATCGAATTACGAATCAATTAATGTTTGTTCCTCCTAACTACGAGGAAATTAAAAACGAGGGGAGGCTCAAAACTATACTACTCTATAACGGTCTCGGCCCTTGGAATGTGAAGCAAGGCAGGAGTGTGTTTACATCTGCCAAATGCCCAGTTGATACATGCCAAATCACACAGAACCGTGACAGAGCCAAAGATGCTGATCTCATAATCTACAAGGACCACTACATTCCGACCGGCATTCAAAAGCATCCAAGGCAGTTATATATGCTTTATTTCCTAGAATGCCCTTATCACACTCAGCATATCAAGTTTCCTGACGTTTTTAATTGGACTGCTACTTACAGACGTGACTCAGACATCGTGGCACCGTACGAAAGCTGGCAGTATTACGACCCAAAAATAACGCAAATCGAGCAGGATCGAAATTATTCGAAAAACAAAACAAGGAAAGTAGCATGGTTTGTATCGAACTGTTCTGCCCGCAACAATAGATTGAATTTCGCTCATGAGCTCGGAAAATATATACAAGTCGATATCTACGGTGCTTGCGGCAATTTCAAATGTTCTCGTTCGAATGCTGACAAATGCTTTGACATTCTCGATCGGGATTACAAATTTTATTTGGCATTCGAAAACTCCAATTGCAAGGACTACATAACGGAAAAGTTCTTCGTTAACGGACTGTCAAGAAACATTTTGCCAATTGTGATGGGTGCACGTCCTGAAGATTACGAGATGAGTTCACCGCAGAGATCATACATTCATGTCGACGAATTTAGTTCCGCCAAAGAATTAGCCGATTACTTGCATTTATTAGACAAAAATGATGAACTCTACAACTCGTACTTTAAGTGGAAGAACACTGGACAATTTATAAACACCTACTTCTGGTGTCGCGTGTGCTCAATGCTGCATGACGAAGACTCTATCAGTCAGCCAAAATGGTATGAAGACATTAACGACTGGTGGCGAGGGCAGGGCGTTTGCACGAGCGGTAGCTGGAGAAAGTTTCAAGCGAGAAAAGAAGTGATGTCGGATGAC
Protein: 498 (aa)
MRIPKFSLKRCFIIVVVLCALLVFVINFREKEIWHNNKVSVLTAHNQQHHLQQSTHPNYENSNEVRAVVPPDNNNIFENHEVQPISTARLPSQHSINEEMIYQDINDDDESIMSSRPWYFTNGERYPKEAKINKKTKRRLAKIQVWEDTRSDRITNQLMFVPPNYEEIKNEGRLKTILLYNGLGPWNVKQGRSVFTSAKCPVDTCQITQNRDRAKDADLIIYKDHYIPTGIQKHPRQLYMLYFLECPYHTQHIKFPDVFNWTATYRRDSDIVAPYESWQYYDPKITQIEQDRNYSKNKTRKVAWFVSNCSARNNRLNFAHELGKYIQVDIYGACGNFKCSRSNADKCFDILDRDYKFYLAFENSNCKDYITEKFFVNGLSRNILPIVMGARPEDYEMSSPQRSYIHVDEFSSAKELADYLHLLDKNDELYNSYFKWKNTGQFINTYFWCRVCSMLHDEDSISQPKWYEDINDWWRGQGVCTSGSWRKFQARKEVMSDD
| Type | Start | End | Length |
| CDS |
206969 |
207054 |
86 |
| CDS |
207164 |
207311 |
148 |
| CDS |
207867 |
208429 |
563 |
| CDS |
208636 |
208915 |
280 |
| CDS |
208976 |
209059 |
84 |
| CDS |
209136 |
209154 |
19 |
| CDS |
209217 |
209379 |
163 |
| CDS |
209449 |
209537 |
89 |
| CDS |
209607 |
209668 |
62 |
| intron |
207055 |
207163 |
109 |
| intron |
207312 |
207866 |
555 |
| intron |
208430 |
208635 |
206 |
| intron |
208916 |
208975 |
60 |
| intron |
209060 |
209135 |
76 |
| intron |
209155 |
209216 |
62 |
| intron |
209380 |
209448 |
69 |
| intron |
209538 |
209606 |
69 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661902 |
alpha(1,3)fucosyltransferase [Aedes aegypti] gb|EAT36111.1| alpha(1,3)fucosyltransferase [Aedes aegypti] |
0.0 |
| InterPro |
IPR001503 |
Glycosyl transferase, family 10 |
|
| Gene Ontology(BP) |
GO:0006486 |
protein glycosylation |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0008417 |
fucosyltransferase activity |
|
| Pfam |
PF03763.8 |
Remorin, C-terminal region |
0.0012 |
| Pfam |
PF00852.14 |
Glycosyltransferase family 10 (fucosyltransferase) |
1.1e-80 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL011784 |
| H. sapiens |
ENSP00000436413 |
| H. sapiens |
ENSP00000468515 |
| S. invicta |
SI2.2.0_04635 |
| T. castaneum |
TC014343 |
| A. gambiae |
AGAP003191 |
| H. sapiens |
ENSP00000466016 |
| H. sapiens |
ENSP00000468123 |
| C. quinquefasciatus |
CPIJ013202 |
| H. sapiens |
ENSP00000433811 |
| H. sapiens |
ENSP00000286955 |
| H. sapiens |
ENSP00000431708 |
| H. sapiens |
ENSP00000305603 |
| B. mori |
BGIBMGA010226-TA |
| N. vitripennis |
NV15421-PA |
| H. melpomene |
HMEL009498-PA |
| H. sapiens |
ENSP00000467081 |
| H. sapiens |
ENSP00000431880 |
| H. sapiens |
ENSP00000432161 |
| H. sapiens |
ENSP00000252675 |
| D. melanogaster |
FBgn0036485 |
| H. sapiens |
ENSP00000465804 |
| D. plexippus |
DPOGS204991PA |
| P. humanus |
PHUM491860-PA |
| H. sapiens |
ENSP00000432954 |
| H. sapiens |
ENSP00000313398 |
| P. vanderplanki |
Pv.09492 |
| H. sapiens |
ENSP00000467633 |
| H. sapiens |
ENSP00000466880 |
| H. sapiens |
ENSP00000416443 |
| H. sapiens |
ENSP00000436547 |
| A. mellifera |
GB13120-PA |