MidgeBase gene description page [Pn.07742]
Outline
| Gene ID | Pn.07742 |
| Type | Protein coding gene |
| Scaffold | PnScaf7148 |
| Start | 1704 |
| End | 2095 |
| Direction | + |
Sequence
Transcript: 318 (bp)
ATGAAGCTCACACTTTGCTTCTCCGCACTGACTTTCGCCGTCTTCGCTTCATCGTCGACGATCGTGAAAATCACGGTCGAGGATCAGCCGGACTATGCGTCGCTCTTTGACGCCTTTCTAACCCGCCACAGACCCATCGACATCGAGTCTGACTCTCTCGGCTACGAAGCTCGTCTGGTTATCTTCAGGAGAACTCATCAGATGATCGAAAATCACAACCGGCGATACCGAGCCGGTCTCGAGACTTTCGAGATGGGCATCAATAAATTTGCATGCATGACGGTCGACGAAAAGCGGCGTTACCGAAGTGAAGGATGC
Protein: 106 (aa)
MKLTLCFSALTFAVFASSSTIVKITVEDQPDYASLFDAFLTRHRPIDIESDSLGYEARLVIFRRTHQMIENHNRRYRAGLETFEMGINKFACMTVDEKRRYRSEGC
| Type | Start | End | Length |
| CDS |
1704 |
2006 |
303 |
| CDS |
2078 |
2092 |
15 |
| intron |
2007 |
2077 |
71 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
NA |
No hit found |
NA |
| InterPro |
IPR013201 |
Proteinase inhibitor I29, cathepsin propeptide |
|
| Pfam |
PF08246.7 |
Cathepsin propeptide inhibitor domain (I29) |
9.7e-07 |
| Pfam |
PF10848.3 |
Protein of unknown function (DUF2655) |
0.064 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes