MidgeBase gene description page [Pn.07676]
Outline
| Gene ID | Pn.07676 |
| Type | Protein coding gene |
| Scaffold | PnScaf7097 |
| Start | 8726 |
| End | 9412 |
| Direction | + |
Sequence
Transcript: 684 (bp)
ATGACAGTCGAAGAGGACAATTTAACAAATGTTGAGTTTGCAATCAAGATAGAAAACGAACAGTGCTTAAACAAAGTAAAATCGTCGCTTTTGGCTAATGGAGTTGATCAGATTCGCAGTGTCCTTGATGAGGGAGAGGCTCGAATTGTAATTTCCACCAGTAAACCATGGATAGAACTACACGAAGTAATTGAAAAAGCTGGTTTTCAATCGGCCCTCGTAGGATTTAGTGAGCAATCGGCTGTATCAATCCTCGATAAAGGAAACTTGACGAACATCAAGGGAGTTGTGCGATTTTGCGAGAATAAAAAATCGGAAACTTTGGTGATAGATGGAGTCATTGACGGATTGGAGAAAGCAACAGATCACGTGTTGATGATAACTGAGTATGGGGATGTCAGCGATGGATGCAACAACTTAGGCGACACATACAAAAACTCGAGCTTCTCTACAGTGAGCAACGACGTGGGGCGAGTGGTCTTACGAACTGTAACCAAAAGTAAATTGACCATTCCTGAAATTATTGGTAGAGGTGTTTGCATTACAGACTCGGTTTCTGGTGATAAGCTTGCATGCGGAGTCATAAGCAGGTCTGCCGGAATTTTCCAAAATTTCAAACGAATTTGTGTGTGTAGTGGAAAAGTTTTATGGGATGAAAGAGACTTGCAGAACATTGTAAAGAAA
Protein: 228 (aa)
MTVEEDNLTNVEFAIKIENEQCLNKVKSSLLANGVDQIRSVLDEGEARIVISTSKPWIELHEVIEKAGFQSALVGFSEQSAVSILDKGNLTNIKGVVRFCENKKSETLVIDGVIDGLEKATDHVLMITEYGDVSDGCNNLGDTYKNSSFSTVSNDVGRVVLRTVTKSKLTIPEIIGRGVCITDSVSGDKLACGVISRSAGIFQNFKRICVCSGKVLWDERDLQNIVKK
| Type | Start | End | Length |
| CDS |
8726 |
9409 |
684 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001846332 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS43343.1| conserved hypothetical protein [Culex quinquefasciatus] |
2e-42 |
| InterPro |
IPR001424 |
Superoxide dismutase, copper/zinc binding domain |
|
| InterPro |
IPR024142 |
Superoxide dismutase copper chaperone |
|
| InterPro |
IPR024134 |
Superoxide dismutase (Cu/Zn) / chaperones |
|
| Gene Ontology(BP) |
GO:0006801 |
superoxide metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0046872 |
metal ion binding |
|
| Pfam |
PF00080.15 |
Copper/zinc superoxide dismutase (SODC) |
3.7e-09 |
| Pfam |
PF07861.6 |
WisP family N-Terminal Region |
0.079 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000436318 |
| D. plexippus |
DPOGS207913PA |
| A. gambiae |
AGAP007026 |
| S. invicta |
SI2.2.0_00478 |
| M. musculus |
ENSMUSG00000034108 |
| C. quinquefasciatus |
CPIJ004568 |
| D. melanogaster |
FBgn0010531 |
| T. castaneum |
TC010027 |
| H. sapiens |
ENSP00000307870 |
| P. vanderplanki |
Pv.08727 |
| A. aegypti |
AAEL012368 |
| N. vitripennis |
NV14239-PA |
| D. plexippus |
DPOGS204910PA |
| B. mori |
BGIBMGA001698-TA |
| A. aegypti |
AAEL009436 |
| A. mellifera |
GB14210-PA |