MidgeBase gene description page [Pn.07668]
Outline
| Gene ID | Pn.07668 |
| Type | Protein coding gene |
| Scaffold | PnScaf7088 |
| Start | 5732 |
| End | 6441 |
| Direction | - |
Sequence
Transcript: 552 (bp)
ATGCCGACCTGGAATCAGATTCAAAGTCAATTGAGAAATCCAAGCAACCCCGTCGTATTTCTGGACATTTCGATCGGCAACACAGAGGTGGGAAGAATCATAATCGAGCTGTTTAGCGACATCGTGCCAAAGACGGCGGAGAACTTCCGGCAGTTCTGCACAGGCGAGTACAAGCCGCAAGGAGTCAGCGTGGGCTACAAAAACTCGCATTTTCACCGCGTCATCAAGGACTTCATGGTGCAGGCCGGAGACTTTGTCGCCAATGACGGCACCGGCGTCCTCTCAATATACGGCACCGACACATTTCCGGACGAAAACTTCAACCTCAAGCACGAAACTGCGGGACTTTTGTCGAGCGCCAACAGCGGTCCTCACACGAATGGCTGTCAGTTCTTCATAACTTGCGCGAAGTGCTCGTTTCTCGACAACAAGCACGTCGTGTTCGGGCGAGTCCTCGACGGCATGCTCATCGTGAGGAAAATCGAGAATGTGCCGACGGCCGGCAGCAACAAGCCGCGCATTCCCGTCGTCATCACTCAGTGCGGGCAGCTG
Protein: 184 (aa)
MPTWNQIQSQLRNPSNPVVFLDISIGNTEVGRIIIELFSDIVPKTAENFRQFCTGEYKPQGVSVGYKNSHFHRVIKDFMVQAGDFVANDGTGVLSIYGTDTFPDENFNLKHETAGLLSSANSGPHTNGCQFFITCAKCSFLDNKHVVFGRVLDGMLIVRKIENVPTAGSNKPRIPVVITQCGQL
| Type | Start | End | Length |
| CDS |
5735 |
6201 |
467 |
| CDS |
6357 |
6441 |
85 |
| intron |
6202 |
6356 |
155 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002423251 |
peptidyl-prolyl cis-trans isomerase H, putative [Pediculus humanus corporis] gb|EEB10513.1| peptidyl-prolyl cis-trans isomerase H, putative [Pediculus humanus corporis] |
3e-81 |
| InterPro |
IPR002130 |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain |
|
| InterPro |
IPR020892 |
Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site |
|
| Gene Ontology(BP) |
GO:0006457 |
protein folding |
|
| Gene Ontology(MF) |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
|
| Pfam |
PF00160.16 |
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
1.6e-45 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB12479-PA |
| B. mori |
BGIBMGA006771-TA |
| H. melpomene |
HMEL012271-PA |
| N. vitripennis |
NV16288-PA |
| D. plexippus |
DPOGS208119PA |
| A. gambiae |
AGAP007392 |
| A. aegypti |
AAEL003477 |
| P. humanus |
PHUM045440-PA |
| D. melanogaster |
FBgn0033089 |
| T. castaneum |
TC010612 |
| M. musculus |
ENSMUSG00000060288 |
| P. vanderplanki |
Pv.06052 |
| S. invicta |
SI2.2.0_04316 |
| H. sapiens |
ENSP00000306614 |
| C. quinquefasciatus |
CPIJ010561 |