MidgeBase gene description page [Pn.07556]
Outline
| Gene ID | Pn.07556 |
| Type | Protein coding gene |
| Scaffold | PnScaf6959 |
| Start | 1629 |
| End | 6650 |
| Direction | + |
Sequence
Transcript: 2001 (bp)
ATGCCAGAACAGAACGTATTCCAGCCCGACCCGAAGCTGTCACGCTCCTCGTATGTGTCGTCGATGCAGCAGTATGAGGAACTCTACAAGGAGTCCATCGAGCACCCCGAAAAGTTCTGGGGCAATATCGCGAAGCAATTTCACTGGGAAACGCCAGCCGATCCGAAGAAGTTCCTCGCCTACAACTTCGACATCTCAAAGGGCCCGATCTCCATCAAGTGGATGGAGGGCGCGTCGACAAACATTTGCTACAATCTCCTCGATCGGAACATTAAAAATGGACATGGTGATAAAATTGCATTTTATTGGGAGGGCAACCATCCGGAGGACTTTACGCGCTTCACTTATCGCAAGCTGCTGGAGGAGGTGTGTCGCTTCGCAAATGTCCTCAAAATGCACGGCGTCAACAAGGGAGATCGCGTGGCCATTTACATGCCAATGATTATGGAGACGCCAATTGCGATGCTCGCATGTGCACGCATCGGTGCCGTTCACTCGATTGTCTTTGCAGGCTTTTCGTCAGATTCGCTCGCGGAGCGCATGAAGGACTGCAAGGCGAAGGTCTTGCTCACGAGCGACGGCGCCTGGCGAGGCGAGAAACTGCTGCATTTGAAAAAGATTTGCGATCAGGCGCTCGAGAAGGCCGAGGAATTGGGTCACCATGTTGAGACGTGCATTGTTGTGCGGCACATTAACCGCGTCACCGCTCCCAAGCCCGAGCTCGCCGAGGACTTTTCCGTCGACATGCGCGATGACCGCGACTTCTGGTGGCACGACGAGATGGAGGACGTCGAGCCGAGCTGCTATCCCGAGTGGACGAGCGTCGAGGATCCGCTCTTCATGCTCTATACGAGTGGCTCGACCGGCAAGCCAAAAGGTGTGCTGCACACGACCGGCGGCTACCTGCTATATGCCAGCACCACATTCAAGCTCGTCTTCGACTACAAGCCCAACGACATCTACTGGTGCACGGCCGACATCGGCTGGATCACTGGCCACAGCTACGTCGTTTATGGGCCACTCGCAAACGGTGCCACATCCGTCATGTTCGAAGGAACGCCATTCTACCCAGACATCGACCGCTACTGGCAGGTGATTGAGAAGTACAAGGTCACTCAGTTCTACACGGCACCAACGGCACTGCGCTCGCTCATGAAGTTCGGCGATCAGCCTCCGCAAAAGCACAACCTAGATACGCTGAAAGTGCTCGGCAGCGTCGGCGAGCCAATTAATCCCGAAGCATGGCTGTGGTACTACAAGGTCATCGGCAAGGAAAAGTGCTCGATTGTCGACACATTCTGGCAGACTGAGACGGGCGGTCACGTCATCACGCCCCTGCCCGGATGTACACCCATGAAGCCGGGATCTGCCTCGTTTCCCTTCTTCGGCGTGAAGCCGAGTCTTCTCGACGAGGGCGGCAAGGAGATTGAAGGCGAGGGCGAAGGCTACTTGGTCTTCTCGCAGCCCTGGCCCGGCATGATGCGTACCGTCTTCAACGACCATCCGCGCTTCGAGTCGACCTACTTCTCGAAGTTCCCCGGCTACTACTGCACCGGCGACGGAGCACGCCGTGATGCCGACGGCTACCTGTGGATCACTGGACGTGTCGACGACATGCTGAACGTTTCGGGCCATTTGATGGCCACCGCCGAGGTCGAGGCCGTTCTCACTGAGCATCCTCGCGTGTCCGAATCGGCCGTTGTGTCGCGACCCCATCCGGTGAAGGGAGAGTGTCTCTACTGCTTCATCACGCCCAATCAGAACGAAACATTCGACAAGAAGCTCGTCGACGAGCTCAAGGTGCTGGTTCGCGAGAGAATAGGTCCATTTGCTCAGCCGGACGTCATTCAGCACGCACCGGGACTGCCAAAAACACGCTCCGGCAAGATCATGAGGAGAATTCTGAGAAAAGTCGCAGTAAATGACAGAGAAGTCGGCGACATTTCGACACTCGCCGAGGAGCAGATCGTAGAAATTCTTTTCCAAAATCGACCAGAGAAA
Protein: 667 (aa)
MPEQNVFQPDPKLSRSSYVSSMQQYEELYKESIEHPEKFWGNIAKQFHWETPADPKKFLAYNFDISKGPISIKWMEGASTNICYNLLDRNIKNGHGDKIAFYWEGNHPEDFTRFTYRKLLEEVCRFANVLKMHGVNKGDRVAIYMPMIMETPIAMLACARIGAVHSIVFAGFSSDSLAERMKDCKAKVLLTSDGAWRGEKLLHLKKICDQALEKAEELGHHVETCIVVRHINRVTAPKPELAEDFSVDMRDDRDFWWHDEMEDVEPSCYPEWTSVEDPLFMLYTSGSTGKPKGVLHTTGGYLLYASTTFKLVFDYKPNDIYWCTADIGWITGHSYVVYGPLANGATSVMFEGTPFYPDIDRYWQVIEKYKVTQFYTAPTALRSLMKFGDQPPQKHNLDTLKVLGSVGEPINPEAWLWYYKVIGKEKCSIVDTFWQTETGGHVITPLPGCTPMKPGSASFPFFGVKPSLLDEGGKEIEGEGEGYLVFSQPWPGMMRTVFNDHPRFESTYFSKFPGYYCTGDGARRDADGYLWITGRVDDMLNVSGHLMATAEVEAVLTEHPRVSESAVVSRPHPVKGECLYCFITPNQNETFDKKLVDELKVLVRERIGPFAQPDVIQHAPGLPKTRSGKIMRRILRKVAVNDREVGDISTLAEEQIVEILFQNRPEK
| Type | Start | End | Length |
| CDS |
1629 |
1936 |
308 |
| CDS |
4003 |
4198 |
196 |
| CDS |
4672 |
5214 |
543 |
| CDS |
5500 |
5654 |
155 |
| CDS |
5717 |
5832 |
116 |
| CDS |
5897 |
6400 |
504 |
| CDS |
6469 |
6647 |
179 |
| intron |
1937 |
4002 |
2066 |
| intron |
4199 |
4671 |
473 |
| intron |
5215 |
5499 |
285 |
| intron |
5655 |
5716 |
62 |
| intron |
5833 |
5896 |
64 |
| intron |
6401 |
6468 |
68 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_316594 |
AGAP006569-PA [Anopheles gambiae str. PEST] gb|EAA11289.2| AGAP006569-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR024597 |
Acyl-CoA synthase, domain of unknown function DUF3448 |
|
| InterPro |
IPR020845 |
AMP-binding, conserved site |
|
| InterPro |
IPR025110 |
Domain of unknown function DUF4009 |
|
| InterPro |
IPR011904 |
Acetate-CoA ligase |
|
| InterPro |
IPR000873 |
AMP-dependent synthetase/ligase |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0003987 |
acetate-CoA ligase activity |
|
| Gene Ontology(MF) |
GO:0016208 |
AMP binding |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF13193.1 |
Domain of unknown function (DUF4009) |
2.1e-14 |
| Pfam |
PF00501.23 |
AMP-binding enzyme |
3.9e-109 |
| Pfam |
PF11930.3 |
Domain of unknown function (DUF3448) |
1.5e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000337190 |
| A. gambiae |
AGAP006569 |
| S. invicta |
SI2.2.0_14218 |
| M. musculus |
ENSMUSG00000027605 |
| H. sapiens |
ENSP00000439304 |
| H. sapiens |
ENSP00000437657 |
| H. melpomene |
HMEL002823-PA |
| M. musculus |
ENSMUSG00000027452 |
| H. sapiens |
ENSP00000316924 |
| D. melanogaster |
FBgn0012034 |
| A. aegypti |
AAEL015010 |
| H. sapiens |
ENSP00000388793 |
| N. vitripennis |
NV17827-PA |
| A. aegypti |
AAEL000321 |
| C. quinquefasciatus |
CPIJ016639 |
| H. sapiens |
ENSP00000353804 |
| P. vanderplanki |
Pv.02947 |
| T. castaneum |
TC010479 |
| D. plexippus |
DPOGS206130PA |
| S. invicta |
SI2.2.0_01938 |
| A. mellifera |
GB10851-PA |
| B. mori |
BGIBMGA000721-TA |
| H. sapiens |
ENSP00000253382 |