MidgeBase gene description page [Pn.07513]
Outline
| Gene ID | Pn.07513 |
| Type | Protein coding gene |
| Scaffold | PnScaf6925 |
| Start | 27144 |
| End | 30523 |
| Direction | + |
Sequence
Transcript: 2424 (bp)
ATGGGCTGTCGCAGATATATGGAAGATTGCTATTCTGTAGCTTATCAAAAGAATAACAGTGGCAAGGACCTGGAATTTGCATATTTCGCGATGTTTGACGGTCATGGGGGAGATACAGCTGCAAAGTTCGCAAAGAACCATTTGATGAACTTTATCGTGGATCAGCCTGGATTTTGGTCAGAGGATGATGAAGACGTCCTGCAAGCAATAAAAGTCGGCTTTTTAGAATGTCACATGGCAATGTGGCGAGATTTGGATAATTGGCCACCTACTAGTAGCGGACTGCCTAGTACCGCCGGAACCACAGCGAGCATTGCTTTCATTCGCAAAGGAAAATTATATATTGGTCATTGCGGTGACTCGGGCATAGTTCTCGCAAAGGAGAACACTGATTCAACATGGAAAGCCGAACCGCTCACAATCGATCACAAGCCAGACAGTGACTTTGAAAAGGAGCGAATAGAATCCTGCGGAGGAAAAGTCATTGAAAAACAAGGCATTCATCGAGTGGTTTGGTATCGCCCAAAGTTTCCTCATCAAGGACCCATTCGAAGAAATACCAGAATCGAGGAGGTTCCTTTTCTGGCTGTAGCTAGAAGTCTGGGTGATTTATGGTCGTACAATCTCAAAACACAGAAATTTATGGTGTCTCCTGAGCCCGATGTCAGTGTCCACGAAATAAACACCTTGACCGACAAATGCTTAATATTTGCCAGTGATGGTCTATGGAACATTATGGAACCATCGATGGCAGTTAATCTTGTTTATGAGGCCGAATCAATAAATGAACAAAACGCCAAAGTGGGCGTCAAGAGCTGGCGAAATCCGTCACGATACTTGGTCGACGTTGCACTTCAGCGTTGGCGTGATCATCGACTTAGGTCTGATAACACGTCGGTTGTGTGCGTTATGTTAGATGTTCCATATAAGAAAAATTGCAGCGGCATGTTTGGAAATATGCAGCAAGAACACACAAGCAGTAGAACTATTTATGATTATAGTACAAGTGAGGCATATAACCTTGACTACATGGATATAAACTCCTATGGAAGTGAAGAGATTGATCGACATAATTATAACTTATTATCGTCACCGAATCACCATCAGCCACAACCCTTTAATCCTTACCATCAGTTTTACACATCTGGAAGCAGTCAGTTGCCACCTTTTGCTAGTGAACGAGGATATCAACCATTTTCTCAATCGTCGTCATCATCATCTATGTCAAGTATTGACGATCAGTCGATAGCTGCCGAACTCACATATCACACGAGCAGCAATGAAAGTGCCTTCGTTAAAGGTTGCTGTCCGAATGAGAGATTTATGTTGGCGAAGGCAAATGAGCAAATTCACTATCATGTGAGCTATGAACAGCATAAGGAGATGTATCGAAACATGGCACAACAACCTCTTCCTCCTTTACATTATGCTTATCGTCCTGTAATTACCCAACCCTATATGTTACCGTCAATGAACGACAGTAATTTTCATCTTGCACCTACAAGGTCTATGGAAAGATACAACTATTTACGTCCAACAGATGCTGAAGTTGAGGAACTGCATAAGGCAACGGAGGAGGATGAGTTTGATGAACAAAATGTAATCGATCCGGACGATGCCGAAATGGAATGGTCTGACGACGAAGACGAAGAGGATGATGAAGACGAGACTGAGAAAGAAACTGAGATTAGTGAGAAGAAAGCAACGGCTAAAGCAGCAACTACAAATGAGCACAATGAGGCAGAGACGAGTGGTAATGATATTACGAGCGAAGTTTTTGACATGAAAAACTCAGATGACTCGATACAAATTTTCGAGATTTCTTCATCAAACATTGGAATCAGTGGAAAATCGAAGAACAAAGAAAAATCTTCTGTTAATGAAAAAAAGCAAAACACTTTGCCGGAAACCAGTAATAACAAAGAAAACTCAGAAACACCCGTTCGTAAGCGCAAACCAAGCAAATCACCAGTAAAGCAGAGTCGGTATTATGAAACTCGGCAAACAAATCGCAAAATGAGATCGGGCACCATTTGTTCGGGTGTTCAAAAGACTATTAGCAAAGAGAGGCACAAGAAAATTGCTCGATATGTTAAGAAAACAATTAAGACAATGGCTGATTTAAAAACAAGTACTTCAATAGCATTAAAAAAGTTGGAAACTCTCTCAATTATAAGCAGTAGTAGCACAAATAATGCAAAATCTGCCCCATCAACATCGAACAAATCTAATAAAAATCATAACAATACCAGTAGCAATTCAACTGCTACTGGCAGCGAAAAATCTTCGAAAAAAATTTTACGCAGCTCACAGATATCAATCAAAAAGGCGAGCGGGAAAGCAACAGGTGTAATGCGAAATTTACGCAGTAGCGCTGTTTTAACCGAGAAGTCAATTCAACGCAAGCGAAATTCGAGAGCCAAG
Protein: 808 (aa)
MGCRRYMEDCYSVAYQKNNSGKDLEFAYFAMFDGHGGDTAAKFAKNHLMNFIVDQPGFWSEDDEDVLQAIKVGFLECHMAMWRDLDNWPPTSSGLPSTAGTTASIAFIRKGKLYIGHCGDSGIVLAKENTDSTWKAEPLTIDHKPDSDFEKERIESCGGKVIEKQGIHRVVWYRPKFPHQGPIRRNTRIEEVPFLAVARSLGDLWSYNLKTQKFMVSPEPDVSVHEINTLTDKCLIFASDGLWNIMEPSMAVNLVYEAESINEQNAKVGVKSWRNPSRYLVDVALQRWRDHRLRSDNTSVVCVMLDVPYKKNCSGMFGNMQQEHTSSRTIYDYSTSEAYNLDYMDINSYGSEEIDRHNYNLLSSPNHHQPQPFNPYHQFYTSGSSQLPPFASERGYQPFSQSSSSSSMSSIDDQSIAAELTYHTSSNESAFVKGCCPNERFMLAKANEQIHYHVSYEQHKEMYRNMAQQPLPPLHYAYRPVITQPYMLPSMNDSNFHLAPTRSMERYNYLRPTDAEVEELHKATEEDEFDEQNVIDPDDAEMEWSDDEDEEDDEDETEKETEISEKKATAKAATTNEHNEAETSGNDITSEVFDMKNSDDSIQIFEISSSNIGISGKSKNKEKSSVNEKKQNTLPETSNNKENSETPVRKRKPSKSPVKQSRYYETRQTNRKMRSGTICSGVQKTISKERHKKIARYVKKTIKTMADLKTSTSIALKKLETLSIISSSSTNNAKSAPSTSNKSNKNHNNTSSNSTATGSEKSSKKILRSSQISIKKASGKATGVMRNLRSSAVLTEKSIQRKRNSRAK
| Type | Start | End | Length |
| CDS |
27144 |
27147 |
4 |
| CDS |
27262 |
27358 |
97 |
| CDS |
27595 |
27686 |
92 |
| CDS |
27813 |
27875 |
63 |
| CDS |
28291 |
28732 |
442 |
| CDS |
28795 |
30520 |
1726 |
| intron |
27148 |
27261 |
114 |
| intron |
27359 |
27594 |
236 |
| intron |
27687 |
27812 |
126 |
| intron |
27876 |
28290 |
415 |
| intron |
28733 |
28794 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_396110 |
PREDICTED: hypothetical protein LOC412655 [Apis mellifera] |
1e-109 |
| InterPro |
IPR000222 |
Protein phosphatase 2C, manganese/magnesium aspartate binding site |
|
| InterPro |
IPR001932 |
Protein phosphatase 2C-like |
|
| InterPro |
IPR015655 |
Protein phosphatase 2C |
|
| Gene Ontology(BP) |
GO:0006470 |
protein dephosphorylation |
|
| Gene Ontology(CC) |
GO:0008287 |
protein serine/threonine phosphatase complex |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Gene Ontology(MF) |
GO:0004722 |
protein serine/threonine phosphatase activity |
|
| Pfam |
PF00481.16 |
Protein phosphatase 2C |
2.9e-58 |
| Pfam |
PF13672.1 |
Protein phosphatase 2C |
4.6e-05 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.05769 |
| S. invicta |
SI2.2.0_02654 |
| T. castaneum |
TC015174 |
| A. aegypti |
AAEL007171 |
| H. melpomene |
HMEL014044-PA |
| M. musculus |
ENSMUSG00000020525 |
| A. gambiae |
AGAP004291 |
| A. aegypti |
AAEL010446 |
| H. sapiens |
ENSP00000376720 |
| A. mellifera |
GB15832-PA |
| H. sapiens |
ENSP00000306682 |
| D. melanogaster |
FBgn0022768 |
| P. vanderplanki |
Pv.01593 |
| N. vitripennis |
NV50005-PA |
| C. quinquefasciatus |
CPIJ016167 |
| D. plexippus |
DPOGS207075PA |
| B. mori |
BGIBMGA013030-TA |
| P. humanus |
PHUM214070-PA |