MidgeBase gene description page [Pn.07429]
Outline
| Gene ID | Pn.07429 |
| Type | Protein coding gene |
| Scaffold | PnScaf6829 |
| Start | 3498 |
| End | 4919 |
| Direction | + |
Sequence
Transcript: 1284 (bp)
ATGGCAGATATCAATAAAAAGATTGGCGAATACAAATTGGGAAAGCTTCTTAACGAAGGCAAGACAAAACAAATTTATGACCTTCCAGAAAATGCTGGATATGTTTTGCTTTTGAACAAGGATAGAATAAGCGCAAATAATGGAGTTCGCGTTCACGATTTAGAAGGCAAAGCAGAAATCTCGAATAAAACAAACGCAAAAGTTTTTGATTTGTTAAATCATGCTGGAGTTAAAACAGCCTTTGTGAAGCTTGCATCAGACAATGCATTCATTGCAAGAAAGTGCGAGATGGTTCCAATTGAATGGGTCACTCGTCGACTGGCTACCGGCTCATTTCTGAAGAGAAACCCAGGAATTCAGGAAGGTCTACGATTTTGTCCGCCAAAGCAGGAAACATTTTTCAAAGACGATGCTAATGATGACCCACAATGGAGCGAGGAACAGATTGTGGCAGCAAAGTTCAATGTCAATAAATTACTAATTACTCAAGATGAAGTTGACATCATGCGTCAAACAACGATTCTCGTTTTTGAGATTCTTGAAAGAGCGTGGGCCACCAAAAACTGTGCGCTTATTGATATGAAGATTGAATTTGGCGTGGATGAGAAAGGAGAGATTCTAGTTGCTGATGTTATTGACTCCGACTCCTGGCGCTTGTGGCCAAATTGTGACAAGCGATTGATGGTTGACAAACAAGTCTATCGAAATCTTACGAGCGTGACAAGCAGCGATTTGGAGACCGTAAAGAGGAACTTTCAGTGGGTGCATGATCAGTTAACTGACATCACTCCGAGGAACGATCATCTTGTTGTTATCATAATGGGGTCACCCTCAGATAAAGAGCATTGTCATAAGATTTTGAAGCATTGCAACGAGCTTGGATTGAATGCCGAAATGAGGGTTTCGTCTGCTCACAAAGTTACTCAGGGCACTCTCAAAATAATGTCTGAGTATGAGGGCGTTATAAAAAATCTTGTCTTTATCACAGTTGCTGGCCGATCGAATGGCTTGGGCCCCGTTTTGTCTGGTAACACTTCATATCCGGTTATTAATTGTCCTCCTATCAAAGCCGATACATTGAACATTGATTTATGGTCATCGATAAATGTGCCATCTGGACTGGGTTGTGCAACAGTAATTTACCCTGAAGCAGCAGCTCTTAATGCCGCTCAAATTCTAGGTCTCTCAAACTTCATGATTTGGTCACGCTTGCGAGTTAAAATGATCAACAATTTGATCAGCTTGAAGAAGGCTGATCAAGAAATCCGTGGCATAAAAGAAGCT
Protein: 428 (aa)
MADINKKIGEYKLGKLLNEGKTKQIYDLPENAGYVLLLNKDRISANNGVRVHDLEGKAEISNKTNAKVFDLLNHAGVKTAFVKLASDNAFIARKCEMVPIEWVTRRLATGSFLKRNPGIQEGLRFCPPKQETFFKDDANDDPQWSEEQIVAAKFNVNKLLITQDEVDIMRQTTILVFEILERAWATKNCALIDMKIEFGVDEKGEILVADVIDSDSWRLWPNCDKRLMVDKQVYRNLTSVTSSDLETVKRNFQWVHDQLTDITPRNDHLVVIIMGSPSDKEHCHKILKHCNELGLNAEMRVSSAHKVTQGTLKIMSEYEGVIKNLVFITVAGRSNGLGPVLSGNTSYPVINCPPIKADTLNIDLWSSINVPSGLGCATVIYPEAAALNAAQILGLSNFMIWSRLRVKMINNLISLKKADQEIRGIKEA
| Type | Start | End | Length |
| CDS |
3498 |
3519 |
22 |
| CDS |
3655 |
4916 |
1262 |
| intron |
3520 |
3654 |
135 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001657043 |
purine biosynthesis protein 6, pur6 [Aedes aegypti] gb|EAT45109.1| purine biosynthesis protein 6, pur6 [Aedes aegypti] |
0.0 |
| InterPro |
IPR018236 |
SAICAR synthetase, conserved site |
|
| InterPro |
IPR000031 |
N5-carboxyaminoimidazole ribonucleotide mutase PurE domain |
|
| InterPro |
IPR013816 |
ATP-grasp fold, subdomain 2 |
|
| InterPro |
IPR001636 |
SAICAR synthetase |
|
| Gene Ontology(BP) |
GO:0006164 |
purine nucleotide biosynthetic process |
|
| Gene Ontology(BP) |
GO:0006189 |
'de novo' IMP biosynthetic process |
|
| Gene Ontology(MF) |
GO:0005524 |
ATP binding |
|
| Gene Ontology(MF) |
GO:0004639 |
phosphoribosylaminoimidazolesuccinocarboxamide synthase activity |
|
| Gene Ontology(MF) |
GO:0034023 |
5-(carboxyamino)imidazole ribonucleotide mutase activity |
|
| Pfam |
PF00731.15 |
AIR carboxylase |
5.4e-33 |
| Pfam |
PF01259.13 |
SAICAR synthetase |
1.2e-73 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000424053 |
| H. sapiens |
ENSP00000421096 |
| A. mellifera |
GB14262-PA |
| P. vanderplanki |
Pv.06282 |
| H. sapiens |
ENSP00000424907 |
| M. musculus |
ENSMUSG00000029247 |
| H. sapiens |
ENSP00000382595 |
| B. mori |
BGIBMGA007935-TA |
| D. melanogaster |
FBgn0020513 |
| N. vitripennis |
NV11180-PA |
| A. gambiae |
AGAP000180 |
| A. aegypti |
AAEL003606 |
| T. castaneum |
TC016225 |
| H. melpomene |
HMEL004189-PA |
| H. sapiens |
ENSP00000264221 |
| C. quinquefasciatus |
CPIJ801627 |
| D. plexippus |
DPOGS208829PA |
| P. humanus |
PHUM430820-PA |
| S. invicta |
SI2.2.0_07244 |