MidgeBase gene description page [Pn.07428]
Outline
| Gene ID | Pn.07428 |
| Type | Protein coding gene |
| Scaffold | PnScaf6829 |
| Start | 250 |
| End | 2166 |
| Direction | - |
Sequence
Transcript: 1671 (bp)
ATGTATGTTATTTCATCCTGCAGTTATTACAACACTAATCAAACAGTTGAGCGAATAAACATGGAAGCAAAAAACGATGCAACAAGTGCAGGAACAAGTGGAAGCGTGAAAAAATATTCAAACAATGGCAAAAGATATGGCCGTGGGGCAGTTGAAAGCGGTCTTACACATGAATGCGGAGTTTTCGGGTGCATTGCAGTTGGTGACTGGCCAACTCAACTAGACATAGCGCAAACCGTGTGTTTAGGCCTCGTAGCACTTCAACATCGCGGACAAGAATCTGCCGGAATTGTCACCAGCGAAGGTGATCACGAGAAAAACTTTCATATTCACAAGGGAATGGGAATGATAAATAATATTTTCACGGACGAAAATATAAAGAAGCTCAAAGGAAATCTTGGAATAGGACATACGAGATACTCTACTTCGGCTGCAAGCGAGGAAGTTAATTGCCAACCTTTTGTTGTGCACACAATGCATGGGGCTATCGCACTCGCTCACAATGGAGAACTTGTTAATTGCGAAAGTCTACGAAAAGAAGTTCTTGGCAGAGGTGTTGGTTTATCGACTTTCAGCGATTCTGAATTAATAACGCAGTCGCTTTGCGTAAATCCTCCGGTTGATGAAGTTGATGGTCCGAATTGGCCATCAAGAATTCGCCATCTCATGAAATTGACTCCTCTTAGTTATTCTCTTGTCATAATGATGAAAGACAAAATCTATGGTGTACGCGATCCGTTTGGAAATCGACCGCTTTGCTTGGGTAAAATTTTATCATTAGATCCTTCCAACTCAAACCAGCGAAAACTGTCAAATGGGTACGGTAATGGTCGCCAACAAAAAACTGAAGATGTTGATGGCTACGTTATTTCAAGCGAGTCATGCGGATTCTTGTCGATCGGTGCCCGTTACATAAGAGAAGTTTCGCCTGGTGAGATCGTTGAACTGTCCCGAGATGGAATAAGAACAATCGATATCGTCGAGCGCCCTGATGGAAAAGACCGTCAGGCTTTTTGTATTTTCGAGTATGTGTATTTTGCTCGATCGGATACGATTTTTGAGGGACAAATGGTGTATTCCGTTAGAATGGAATGTGGCCGACAACTGGCTAGAGAAGCCTTTATAGATGCTGATATTGTTAGTTCAGTACCGGAAAGTGGTACCGCTGCTGCTCATGGCTTTTCACGCGAGTCCAAAATAGATTTTGCTGAAGTCTTATGTAAAAATCGATATGTCGGAAGAACTTTTATTCAACCTTCAACGCGTTTAAGACAACTTGGAGTTGCAAAAAAATTTGGAGCTCTTTCGGAGAACGTCGCAGGCAAACGTCTTGTTCTTATCGATGACTCAATCGTTCGAGGAAATACAATAGGTCCAATAATTAAGCTGCTCCGAGATGCAGGTGCGAAAGAAGTCCATATAAGAATTGCTTCTCCACCACTTCTCTATCCATGTTACATGGGAATAAACATTCCCACACGCGAGGAACTAATAGGTAACAAGCTGACTCCAACAGAGTTGGCACGACAAATCAACGCAGACAGCTTAGCCTATTTGTCGGTCGATGGTCTCATTAAGGCTGTACGAACTAATTTAAAAACGAGTACTCCGAAAACTACAGGACATTGCACTGCTTGTCTGACAGGTGAATACCCAATTGAGCTTGATTGG
Protein: 557 (aa)
MYVISSCSYYNTNQTVERINMEAKNDATSAGTSGSVKKYSNNGKRYGRGAVESGLTHECGVFGCIAVGDWPTQLDIAQTVCLGLVALQHRGQESAGIVTSEGDHEKNFHIHKGMGMINNIFTDENIKKLKGNLGIGHTRYSTSAASEEVNCQPFVVHTMHGAIALAHNGELVNCESLRKEVLGRGVGLSTFSDSELITQSLCVNPPVDEVDGPNWPSRIRHLMKLTPLSYSLVIMMKDKIYGVRDPFGNRPLCLGKILSLDPSNSNQRKLSNGYGNGRQQKTEDVDGYVISSESCGFLSIGARYIREVSPGEIVELSRDGIRTIDIVERPDGKDRQAFCIFEYVYFARSDTIFEGQMVYSVRMECGRQLAREAFIDADIVSSVPESGTAAAHGFSRESKIDFAEVLCKNRYVGRTFIQPSTRLRQLGVAKKFGALSENVAGKRLVLIDDSIVRGNTIGPIIKLLRDAGAKEVHIRIASPPLLYPCYMGINIPTREELIGNKLTPTELARQINADSLAYLSVDGLIKAVRTNLKTSTPKTTGHCTACLTGEYPIELDW
| Type | Start | End | Length |
| CDS |
253 |
682 |
430 |
| CDS |
748 |
1168 |
421 |
| CDS |
1239 |
2027 |
789 |
| CDS |
2136 |
2166 |
31 |
| intron |
683 |
747 |
65 |
| intron |
1169 |
1238 |
70 |
| intron |
2028 |
2135 |
108 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001657044 |
amidophosphoribosyltransferase [Aedes aegypti] ref|XP_001657045.1| amidophosphoribosyltransferase [Aedes aegypti] gb|EAT45110.1| amidophosphoribosyltransferase [Aedes aegypti] gb|EAT45111.1| amidophosphoribosyltransferase [Aedes aegypti] |
0.0 |
| InterPro |
IPR000583 |
Class II glutamine amidotransferase domain |
|
| InterPro |
IPR000836 |
Phosphoribosyltransferase |
|
| InterPro |
IPR005854 |
Amidophosphoribosyl transferase |
|
| InterPro |
IPR017932 |
Glutamine amidotransferase type 2 domain |
|
| Gene Ontology(BP) |
GO:0009116 |
nucleoside metabolic process |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(BP) |
GO:0009113 |
purine base biosynthetic process |
|
| Gene Ontology(MF) |
GO:0004044 |
amidophosphoribosyltransferase activity |
|
| Pfam |
PF00310.16 |
Glutamine amidotransferases class-II |
1.8e-23 |
| Pfam |
PF13230.1 |
Glutamine amidotransferases class-II |
1.5e-05 |
| Pfam |
PF13537.1 |
Glutamine amidotransferase domain |
7.7e-11 |
| Pfam |
PF13522.1 |
Glutamine amidotransferase domain |
4.5e-16 |
| Pfam |
PF00156.22 |
Phosphoribosyl transferase domain |
5.9e-13 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000029246 |
| S. invicta |
SI2.2.0_04259 |
| T. castaneum |
TC000530 |
| C. quinquefasciatus |
CPIJ801629 |
| A. mellifera |
GB16566-PA |
| D. plexippus |
DPOGS208787PA |
| P. vanderplanki |
Pv.06281 |
| H. sapiens |
ENSP00000264220 |
| D. melanogaster |
FBgn0004901 |
| D. melanogaster |
FBgn0041194 |
| T. castaneum |
TC016203 |
| N. vitripennis |
NV11181-PA |
| B. mori |
BGIBMGA007647-TA |
| A. aegypti |
AAEL003581 |
| A. gambiae |
AGAP000179 |
| H. melpomene |
HMEL004190-PA |
| P. humanus |
PHUM430830-PA |