MidgeBase gene description page [Pn.07424]
Outline
| Gene ID | Pn.07424 |
| Type | Protein coding gene |
| Scaffold | PnScaf6822 |
| Start | 53 |
| End | 1375 |
| Direction | - |
Sequence
Transcript: 843 (bp)
ATGGCTTCTAGACTTGATCGTCCATCGATTTCATCCTTCGAGGACGATGAAATTTACTTAAGAAAACGAATTCGAGATCAATCTCCATCGATCGATCGCTTAGATGCTGATAATGACAGTTTAGCTCTCTCCGAGGAGGAGGAGGACCTGGGGTGCCCATTACCGAGTACGCCCGAGGATAGCGATTTACTAGAAGCTGAGATGACTGAGGTGCTTAAAGCTGGTGTGCTTTCCGATGAAATCGACTTGGGTGCGCTCGCTCATAACGCTGCTGAGCAAGCGGAAGTGTTTGTTAGGAAAGTCTGGGAGGCTTCGTGGAAGGTCGTTCACTTTAAAAATTTACCAAAGTGGCTACAGGACAACGACTACTTGCACAAGGGACATCGGCCACCGCTCGCCTCCTTCGGAGCGTGCTTCAAATCAATCTTTAGACTGCACACTGAAACTGGCAACATTTGGACTCATTTGCTGGGATGTCTGATGTTCATCGGAGCAACAATTTATTTCCTAATTAGACCCGCATGGCAGATCAACCTCGAGGAGAAAATGATATTCCTGAGCTTCTTCATTGGCGCAATCGTGTGCCTGGGCTTTTCATTTGCGTTCCACACCGTCTCATGCCACTCGGAAATGATTGGAAAGCTTTTCAGCAAACTAGATTACTGCGGAATTGCGTTGTTAATTATGGGAAGCTTCGTGCCGTGGCTCTATTACGGATTCTACTGTCATTATCAGCCGAAGATCATCTATCTAACTATCGTTATCGTTTTAGGATTTTTCTCGATAGTGACTTCGCTTTGGGACAAGTTTTCTACGCCGCAACTACGGCCAGTTAGGTACGTA
Protein: 281 (aa)
MASRLDRPSISSFEDDEIYLRKRIRDQSPSIDRLDADNDSLALSEEEEDLGCPLPSTPEDSDLLEAEMTEVLKAGVLSDEIDLGALAHNAAEQAEVFVRKVWEASWKVVHFKNLPKWLQDNDYLHKGHRPPLASFGACFKSIFRLHTETGNIWTHLLGCLMFIGATIYFLIRPAWQINLEEKMIFLSFFIGAIVCLGFSFAFHTVSCHSEMIGKLFSKLDYCGIALLIMGSFVPWLYYGFYCHYQPKIIYLTIVIVLGFFSIVTSLWDKFSTPQLRPVRYV
| Type | Start | End | Length |
| CDS |
56 |
245 |
190 |
| CDS |
343 |
537 |
195 |
| CDS |
677 |
933 |
257 |
| CDS |
1175 |
1375 |
201 |
| intron |
246 |
342 |
97 |
| intron |
538 |
676 |
139 |
| intron |
934 |
1174 |
241 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001844362 |
adiponectin receptor protein 2 [Culex quinquefasciatus] gb|EDS36702.1| adiponectin receptor protein 2 [Culex quinquefasciatus] |
1e-116 |
| InterPro |
IPR004254 |
Hly-III-related |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF01957.13 |
NfeD-like C-terminal, partner-binding |
0.069 |
| Pfam |
PF01699.19 |
Sodium/calcium exchanger protein |
0.67 |
| Pfam |
PF03006.15 |
Haemolysin-III related |
1e-36 |
| Pfam |
PF03729.8 |
Short repeat of unknown function (DUF308) |
0.96 |
| Pfam |
PF06127.6 |
Protein of unknown function (DUF962) |
1.5 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000341785 |
| M. musculus |
ENSMUSG00000026457 |
| A. mellifera |
GB16540-PA |
| S. invicta |
SI2.2.0_07481 |
| A. gambiae |
AGAP004486 |
| H. sapiens |
ENSP00000356223 |
| T. castaneum |
TC015429 |
| B. mori |
BGIBMGA009418-TA |
| H. sapiens |
ENSP00000402178 |
| H. sapiens |
ENSP00000349616 |
| M. musculus |
ENSMUSG00000030168 |
| D. plexippus |
DPOGS205992PA |
| C. quinquefasciatus |
CPIJ002779 |
| P. humanus |
PHUM499090-PA |
| P. vanderplanki |
Pv.10036 |
| H. sapiens |
ENSP00000395469 |
| D. melanogaster |
FBgn0038984 |
| A. aegypti |
AAEL014717 |