MidgeBase gene description page [Pn.07393]
Outline
| Gene ID | Pn.07393 |
| Type | Protein coding gene |
| Scaffold | PnScaf6790 |
| Start | 227 |
| End | 4191 |
| Direction | + |
Sequence
Transcript: 1755 (bp)
ATGGTTGTGAAAGTAGTCGGTGTACCTCGATCAAGTGCGCGCACACCGATCGTCGCCCGAGTTCCTCAACTGGATGAGGTCCATGCGGAAGAGAGTGAATATGAAAAGGCACTCAAGGCGTATCACACATCACCCGCCTACCTGGCTTACATGTCCACCAAGAGTAGCAAGAAGAACGACGCGAGCGACCTGCACGACATGCCGCGCTCGAGCTCGAAGAGCCAGCAGGACCGCCGCGTGGACATCCAGCCGGCCGAGGACGAGGAGGACCAGGACGACGGGTTCTCGTACAAGCAAGTCGCCTACAACCGCTACACGCGCAACCACAAGCTCATCAACGAGATCTTCTCGGACGCGATTGTGCCGGACGTGCGCTCGGTGGTGACGACCCAGCGCATGCACGTGCTGAAGCGGCAGGTGCAGTCGCTGGCCATGCACCAGATGAAACTGCAAGCGGAATTGCAGCAAATCGAGGAGAAGTTCGAGGCGAAGAAGATGAAGTTCATGGAGAGCTCGGAGCTGTTCCAGGAGGAGCTCAAGAAGCACTGCAAGCCGGCCGTCGACGAGGACACGTTCCAGAAGATGGTCGAGCGGCAGTACGAGGCGCTGAAGCGAGAGCGGCTGCGGCTGATGGAGGACCAGGGCAAGCCGCAGCAGCAGCAGACGCAACAGGCGCAGCACGCCCAACAACAAAAGCCCGCGGCCGAGGAGGTGCCGGTGCAGGCGAACGCCGCCCAGCCGGCCGGAAATGCCGAGATGCCACCGGCCGAGACGCAGAGCGCGAGCGAGCCCATGGACATTGAGCCGCCGATGAAGTCGTCGCAAGAGGTCGAAGCTCCGAAGCCGATCGAGGCCACGGAAGCGTCGGCACCGCCGCCAGCCTCAGCCGCCAACCACATCACCGAAATTCCGCCGGCCGCTCCCAAAGAGCCCACTCCGGTCCAGGAAGCGACACCGGTCGAAGCTCCGCAGCCCGCACCGGCTCCACTGCAACCGACTTCTCCACCGTCCACAGCAGCAGCCCAACCAGAGAGCGCACCTGCCGTCGACGCACCGCCGACTTCCTCCCACATGGCCGTCTCGACGGCGTCGCCACCGACTGCCGTCACAGCCGCTCCTCCTCCCGTGCAAGCGCCTCCCGCTCAAACGCCGCCGTCCACCGCCACGGCGCCACATCCTCCGCCGATGGCCGCGCAAGAGGCGCCGATTCCGGCTCCGAATGTCACCGTCAATCCCAGCATGGGCATGGGCATGCCGCCGCACGGAATGGCACACGGCGCTCCCTACCACGGCTACCCGATGCAGGGCCATCCGCCGCGGCCCTACTACGGCCACATGCCCTACCAGCAGGGCTACCCCAACTACCCCTACGGACACCACATGCCGCCCTACCAGCAGAACTACCATCCGTATGGCGAGGCGCAGGCTCATCCCGGCTACCCGCCGCAGGCGCCGCCCATGCACCCCATGCAGGGTCCGCCCGGCCAGCAACAGCCGCCGCCGCCGCCAACGGTCGCCGGTGCTCCGTCGCAAGTCATACCGCCCGTCAGCGGCGCCGCGCCGCCTCCTAGCACAGTTCCGCCGCAAGCCGCTGCGCCGACCTCTGTAGCGCCCGCCGTGCCGCCACCAACAGCAGTCGTCTCCGCAGCAACAGCAGCAGCAGCACAGGGAAAGATGGAAGAGAAGAATGGCGATGAGGAGCGCGCGGCGAAGAAGGAGGAGGAGGAGGAGGCAGTGAAGGGAGCGGCGAGTGAA
Protein: 585 (aa)
MVVKVVGVPRSSARTPIVARVPQLDEVHAEESEYEKALKAYHTSPAYLAYMSTKSSKKNDASDLHDMPRSSSKSQQDRRVDIQPAEDEEDQDDGFSYKQVAYNRYTRNHKLINEIFSDAIVPDVRSVVTTQRMHVLKRQVQSLAMHQMKLQAELQQIEEKFEAKKMKFMESSELFQEELKKHCKPAVDEDTFQKMVERQYEALKRERLRLMEDQGKPQQQQTQQAQHAQQQKPAAEEVPVQANAAQPAGNAEMPPAETQSASEPMDIEPPMKSSQEVEAPKPIEATEASAPPPASAANHITEIPPAAPKEPTPVQEATPVEAPQPAPAPLQPTSPPSTAAAQPESAPAVDAPPTSSHMAVSTASPPTAVTAAPPPVQAPPAQTPPSTATAPHPPPMAAQEAPIPAPNVTVNPSMGMGMPPHGMAHGAPYHGYPMQGHPPRPYYGHMPYQQGYPNYPYGHHMPPYQQNYHPYGEAQAHPGYPPQAPPMHPMQGPPGQQQPPPPPTVAGAPSQVIPPVSGAAPPPSTVPPQAAAPTSVAPAVPPPTAVVSAATAAAAQGKMEEKNGDEERAAKKEEEEEAVKGAASE
| Type | Start | End | Length |
| CDS |
227 |
321 |
95 |
| CDS |
574 |
656 |
83 |
| CDS |
1420 |
2030 |
611 |
| CDS |
3046 |
3949 |
904 |
| CDS |
4127 |
4188 |
62 |
| intron |
322 |
573 |
252 |
| intron |
657 |
1419 |
763 |
| intron |
2031 |
3045 |
1015 |
| intron |
3950 |
4126 |
177 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001661139 |
hypothetical protein AaeL_AAEL010903 [Aedes aegypti] gb|EAT37063.1| conserved hypothetical protein [Aedes aegypti] |
2e-81 |
| Pfam |
PF05141.7 |
Pyoverdine/dityrosine biosynthesis protein |
0.027 |
| Pfam |
PF01496.14 |
V-type ATPase 116kDa subunit family |
3.9 |
| Pfam |
PF02183.13 |
Homeobox associated leucine zipper |
0.64 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB17453-PA |
| D. plexippus |
DPOGS216111PA |
| C. quinquefasciatus |
CPIJ007400 |
| H. sapiens |
ENSP00000441857 |
| P. vanderplanki |
Pv.05073 |
| H. sapiens |
ENSP00000323967 |
| H. sapiens |
ENSP00000463216 |
| N. vitripennis |
NV11999-PA |
| H. sapiens |
ENSP00000367039 |
| H. melpomene |
HMEL010720-PA |
| H. sapiens |
ENSP00000411607 |
| M. musculus |
ENSMUSG00000037935 |
| A. gambiae |
AGAP001994 |
| H. sapiens |
ENSP00000462475 |
| T. castaneum |
TC007745 |
| D. melanogaster |
FBgn0030093 |
| H. sapiens |
ENSP00000464511 |
| A. aegypti |
AAEL010903 |
| P. humanus |
PHUM055050-PA |
| B. mori |
BGIBMGA009228-TA |
| H. sapiens |
ENSP00000445370 |