MidgeBase gene description page [Pn.07368]
Outline
| Gene ID | Pn.07368 |
| Type | Protein coding gene |
| Scaffold | PnScaf6727 |
| Start | 10886 |
| End | 12165 |
| Direction | - |
Sequence
Transcript: 861 (bp)
ATGGTGGTTATTGCGATTCTTATGCTCCTCATGATGTTTGCCGTTCACTGTACGTGGGTTACGAGCAACGCCTACTCGTCTCCGTCAATCGTGTTGGCGTTTTACAATCAAGGCGACGGCTCGAGAAACATCCTCGATGACTTCCGTGAAGCGTACTACTGGCTTTGGCAAAACACTAAGGATGACGCAACAGTGGCAAGTTGGTGGGACTACGGATATCAGATAGCGGGGATGGCGAATCGGACAACGCTAGTGGATAATAACACGTGGAACAACAGTCACATTGCACTGGTCGGCAAAGCCATGTCGTCTTCGGAGGAGAAGGCTCACGAGATTTACACCTCACTCGGCGCCGACTACGTGCTTGTCATTTTCGGCGGCGTGATTGGCTACTCGGGCGACGACATCAACAAGTTCTTGTGGATGGTGAGAATTGCTGAGGGCGAGCATCCAAAGGACATTCGCGAAAGCGACTTCTTTACTGAGCGCGGTGAATTTAGAGTCGACTCCGAAGGAGCACCGACACTGCTGAACTGCTTGATGTACAAGCTGAGCTACTACAGATTTGGCGACCTAAAGCTCGACTACAGAGGCCCAGCTGGCTTTGACCGCACACGAAATGCAGTCATCGGTAACAAGGACTTTGACTTGACGTACTTCGAAGAGGTTTACACCAGTGAACACTGGCTGGTGCGAATCTATCGCGTAAAGAAGCCAGACGAGTTCAATCGCCCATCGCTCAAGCCCTTGAAGCGATCGGGCAGCAGTGATATGGTAACTAGAAAAACATCGAAAAGAAGGAAAGGCGTCATAAAGAACCGACCAGTGGTTGTAAAAGGAAAGCGGGCGGGAAAAGCCAAC
Protein: 287 (aa)
MVVIAILMLLMMFAVHCTWVTSNAYSSPSIVLAFYNQGDGSRNILDDFREAYYWLWQNTKDDATVASWWDYGYQIAGMANRTTLVDNNTWNNSHIALVGKAMSSSEEKAHEIYTSLGADYVLVIFGGVIGYSGDDINKFLWMVRIAEGEHPKDIRESDFFTERGEFRVDSEGAPTLLNCLMYKLSYYRFGDLKLDYRGPAGFDRTRNAVIGNKDFDLTYFEEVYTSEHWLVRIYRVKKPDEFNRPSLKPLKRSGSSDMVTRKTSKRRKGVIKNRPVVVKGKRAGKAN
| Type | Start | End | Length |
| CDS |
10889 |
10963 |
75 |
| CDS |
11060 |
11255 |
196 |
| CDS |
11419 |
11825 |
407 |
| CDS |
11983 |
12165 |
183 |
| intron |
10964 |
11059 |
96 |
| intron |
11256 |
11418 |
163 |
| intron |
11826 |
11982 |
157 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR29911 |
hypothetical protein AND_00850 [Anopheles darlingi] |
1e-147 |
| InterPro |
IPR003674 |
Oligosaccharyl transferase, STT3 subunit |
|
| Gene Ontology(BP) |
GO:0006486 |
protein glycosylation |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0004576 |
oligosaccharyl transferase activity |
|
| Pfam |
PF02516.9 |
Oligosaccharyl transferase STT3 subunit |
1.5e-42 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM075020-PA |
| C. quinquefasciatus |
CPIJ015587 |
| P. vanderplanki |
Pv.05957 |
| B. mori |
BGIBMGA003428-TA |
| H. melpomene |
HMEL010045-PA |
| H. sapiens |
ENSP00000295770 |
| A. mellifera |
GB15818-PA |
| P. vanderplanki |
Pv.06271 |
| N. vitripennis |
NV18711-PA |
| T. castaneum |
TC010433 |
| D. plexippus |
DPOGS202247PA |
| D. melanogaster |
FBgn0031149 |
| P. humanus |
PHUM459530-PA |
| S. invicta |
SI2.2.0_08486 |
| H. sapiens |
ENSP00000436962 |
| A. aegypti |
AAEL002804 |
| D. plexippus |
DPOGS202246PA |
| A. gambiae |
AGAP002396 |
| N. vitripennis |
NV15224-PA |
| H. melpomene |
HMEL010044-PA |
| T. castaneum |
TC009183 |
| H. sapiens |
ENSP00000432820 |
| C. quinquefasciatus |
CPIJ008679 |
| A. aegypti |
AAEL004228 |
| A. gambiae |
AGAP000434 |
| B. mori |
BGIBMGA004898-TA |
| M. musculus |
ENSMUSG00000032437 |
| A. aegypti |
AAEL015049 |
| D. melanogaster |
FBgn0011336 |
| H. sapiens |
ENSP00000376472 |
| D. plexippus |
DPOGS202154PA |