MidgeBase gene description page [Pn.07288]
Outline
| Gene ID | Pn.07288 |
| Type | Protein coding gene |
| Scaffold | PnScaf6630 |
| Start | 98486 |
| End | 102161 |
| Direction | + |
Sequence
Transcript: 3327 (bp)
ATGGATGAAATTCCTATGGAATATTCGCACTACATGACCGAAAACTTACAAGATGATCCCGAAGCGGGAGAAGGTTCGGGACAAAGAATGACCCGGCTAAGAGCAAGGGGAGGTGTTCCCACAAAGCCACCAATTATTGACGAAGATGATGAAGACATTTTCATGACAGGTCGAAAGAGGAAAATTCCAAAACCGCCAAAGGAGAAAGTTGAACGTGAACCTAAGCCGCCAAGAGTCCGAAAAGAACGGGAAGTAGTCGAAAGAGAGCCAGCTGAGGAGAAAATTGTCAAAGAAAGAGAAATAACGACCGATGAGAACAGTTTGTTTTGGATACTACGATATTCAAAGAACACGATCACAACAATTGTGGACGAGTGGATTGAAAACTACAAAGTAGACCGCGATTCTGCTCTCATATCTCTGATGCAGTTCTTCATTAATGCAAGTGGTTGCAAGGGAAAGATAACACCCGAAATGCAAGTTTCGATGGAACACACATCAATCATCAGAAAGATGACGGAGGAGTTTGACGAAGAAAGTGGTGAATATCCACTCATCATGGCCGGGCAGCAGTGGAAGAAGTTCAAGACTCACTTCTGTGAGTTTGTGCAAACTCTTGTAAAGCAGTGTCAATATTCAATTATTTACGATCAGTTCTTGATGGACAACATAATTTCTCTGCTTACTGGATTGTCTGACTCGCAAGTGCGAGCATTTCGTCATACTGCAACTCTGGCGGCGATGAAGCTCATGACTGCGCTCGTCGACGTTGCCCTTTTGGTTTCAATTAATCAGGATAATGCTGCTCGCCAGTACGAAGGAGAGCGATTGAAAGGAGCACACGACGTTTCGGAGGAACGTCTCGAAAGTTTGATGGCCAAGCGTCAGGAGCTTGAAGAGAATATGGACGAGATTAAAAACATGCTGACATACCTTTTCAAGTCTGTATTCGTCCATCGCTACCGCGATACTTTACCCGATATAAGAGCCATCTGCATGATTGAAATCGGAATCTGGATGCACAAGTTCTCGTCAAACTTTTTGGATGACTCGTATTTGAAATACATTGGTTGGACTCTGCACGACAAAGTCGGCGAAGTTCGATTGCGCTGTCTTCAAGCGCTGCTGCCACTTTACGAGAACGAAGAATTGAAGGGAAAACTGGAATTGTTTACCTCCAAGTTCAAGGACAGAATTGTAGCGATGACATTGGACAAGGAATATGAAGTGGCCGTTCACGCAGTAAAACTTGTCATCAAAATCCTCAAAATTCATCAAGACATTCTCACAGACAAGGATTGTGAAATCGTGTACGAGCTGGTTTACTCATCACACCGTGGCGTCGCGCAGGCAGCTGCAGAATTTTTAAATGTCCGTCTCTTCTTCATAGATCCCTCGGTCGATTCTTACACAAAGCGCGGAAAGAAGAGACTCCCGAACACACCGCTCATTCGTGATTTGGTTCAGTTCTTCATTGAATCGGAACTGCACGAACACGGCGCATATCTCGTTGATTCGTTCATCGAAAGCAATCCGATGATCAAGGATTGGGAGTGCATGACGGACTTGCTTCTAGAGGAATCTGGCCCCGGCGAAGAAGCAATGGATATTAAGCAAGAGTCGACACTAATTGAAATTATGGTCAGCGCGGTGAAGCAAGTGGCGTTGGCCGAGCCTCCTATCGGACGCGGAAGCAATCGGCAAAAGACTCTGACTGCAAAGGAGACCAAGCAAGTTCAGGACGACAAACAAAAGCTGACTGAGCACTTCATACAAACGCTTCCGTATCTTTTGGAAAAATATAGCGCCGACAATGAGAAGCTAATCAATCTTCTGAGCATTCCGCAGTACTTTGATCTCGAAATGTACACGACACTACGACAAGAGGCTTCGCTCAAGTTTCTCCTCGATAAAATCACTCACATCATCGCAATCAACACTGACCGCGAAGTTCTCGAGGCGTGCGCGAAGACAATTGAGTTTTTGTGCACGGAAGGAAGCGCCATTTACACTCAGTGCGATGTTGCGCGCTCAAACATCATTGACGAGAGTGTGAACCGCTACAAGGAGGCAATCGACGACTGGAGAAACCTGATTGCGGGCGAAGAGGTTCCCGACGAAGACGAAATCCATCAAGTTTGCATAAGTCTAAAGAAAGTGTCGATTCTCTACTCTTGCCACAATCTGAACCCGTGGAATCTGTTTACGTCGCTGTTTCAAGATATCGAAGAGTACTTCAATGATACGGCTCACGAGAAGAGTATTCCGATTGAGGCGCTCATTTATTGCATCGAGTCGTGCTTCTTTTCAATCAGTTGGGGAATTGCATCGTTGGAGTCGTCTTTCGAGTCGTCAGCACTTGCCTTCGCAGCAGAAGAATTGCGCCGCAATTTGGACAAATACATGACTGCGTGCAATCATTTGATTAGATCTGGAGATTTGCCAATTAAGGAAGCAGCATACATTTCGATTTGTGATTTATTGGTTATCTGCTCAGCAAATCTCGGAAAGAACTCAAACCGTTACGTACAAATGATGGAATATCGGCCGACAGACGAACAAAAGGATTTACTAATCAACTTTGTCAAGACTTATGTCTTCTCTTCACGCTACGATGAGGTTCAAGATGAAACCCGCATCGAGGAGTTGCACAAGAAGAGAAGTCATCTTGCAGCCTACTGCAAACTTGTCGTGTACAACATTTTACCCACGACAGCTGCGTGCGACATTTTCAAATACTACATCAAGTTTTACAATGATTATGGCGATATCATCAAGACGACGCTCGGCAAGACGCGAGAAAATTCAAAGACAAACTGCACTATGACCATGTGTATGAGTCTGAAAACGGCATTCGAAGAGCTGCAGAATTTCGCAGCACCTGATAAAATTTCACGTTCGAGTCAGGAGTTTAGTGATTTGAAAGAGTTGGCCAAGCGATTTGCACTTTCATTTGGCTTAGATGCGATCAAAAATCGAGAAGTTGTCACGGCTTTGCATCGCGCGGGAATTTTGTTTGCCACTCAAAATCACAGTCCCGATGATCCAAATCCTCCGCAAAATATTCTCTTTCTGGAGGTTCTCAACGAATTCACCAACAAACTTCTCAAGCAGGACAAGAAAGTTGTGCTAAATTTCTTGGACCGTCGAATCGCAATGACGAATATGCCGTCGAGTAACAGTGATGATTGGCAGCCACTACTCAATTATCGCAATTCCTTGCTTCACGGAGAATCCGATCAGGCCGCAACGCCAGTCGTTGTGAACAAAAAGGTCTACACCCGGAAAGGAAAGAAAAGTCAAGCGGGCGAAGAAGAAGGAGATGAT
Protein: 1109 (aa)
MDEIPMEYSHYMTENLQDDPEAGEGSGQRMTRLRARGGVPTKPPIIDEDDEDIFMTGRKRKIPKPPKEKVEREPKPPRVRKEREVVEREPAEEKIVKEREITTDENSLFWILRYSKNTITTIVDEWIENYKVDRDSALISLMQFFINASGCKGKITPEMQVSMEHTSIIRKMTEEFDEESGEYPLIMAGQQWKKFKTHFCEFVQTLVKQCQYSIIYDQFLMDNIISLLTGLSDSQVRAFRHTATLAAMKLMTALVDVALLVSINQDNAARQYEGERLKGAHDVSEERLESLMAKRQELEENMDEIKNMLTYLFKSVFVHRYRDTLPDIRAICMIEIGIWMHKFSSNFLDDSYLKYIGWTLHDKVGEVRLRCLQALLPLYENEELKGKLELFTSKFKDRIVAMTLDKEYEVAVHAVKLVIKILKIHQDILTDKDCEIVYELVYSSHRGVAQAAAEFLNVRLFFIDPSVDSYTKRGKKRLPNTPLIRDLVQFFIESELHEHGAYLVDSFIESNPMIKDWECMTDLLLEESGPGEEAMDIKQESTLIEIMVSAVKQVALAEPPIGRGSNRQKTLTAKETKQVQDDKQKLTEHFIQTLPYLLEKYSADNEKLINLLSIPQYFDLEMYTTLRQEASLKFLLDKITHIIAINTDREVLEACAKTIEFLCTEGSAIYTQCDVARSNIIDESVNRYKEAIDDWRNLIAGEEVPDEDEIHQVCISLKKVSILYSCHNLNPWNLFTSLFQDIEEYFNDTAHEKSIPIEALIYCIESCFFSISWGIASLESSFESSALAFAAEELRRNLDKYMTACNHLIRSGDLPIKEAAYISICDLLVICSANLGKNSNRYVQMMEYRPTDEQKDLLINFVKTYVFSSRYDEVQDETRIEELHKKRSHLAAYCKLVVYNILPTTAACDIFKYYIKFYNDYGDIIKTTLGKTRENSKTNCTMTMCMSLKTAFEELQNFAAPDKISRSSQEFSDLKELAKRFALSFGLDAIKNREVVTALHRAGILFATQNHSPDDPNPPQNILFLEVLNEFTNKLLKQDKKVVLNFLDRRIAMTNMPSSNSDDWQPLLNYRNSLLHGESDQAATPVVVNKKVYTRKGKKSQAGEEEGDD
| Type | Start | End | Length |
| CDS |
98486 |
98517 |
32 |
| CDS |
98586 |
101010 |
2425 |
| CDS |
101082 |
101372 |
291 |
| CDS |
101515 |
101894 |
380 |
| CDS |
101960 |
102158 |
199 |
| intron |
98518 |
98585 |
68 |
| intron |
101011 |
101081 |
71 |
| intron |
101373 |
101514 |
142 |
| intron |
101895 |
101959 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001648855 |
stromal antigen [Aedes aegypti] gb|EAT44349.1| stromal antigen [Aedes aegypti] |
0.0 |
| InterPro |
IPR011989 |
Armadillo-like helical |
|
| InterPro |
IPR016024 |
Armadillo-type fold |
|
| InterPro |
IPR020839 |
Stromalin conservative domain |
|
| InterPro |
IPR013721 |
STAG |
|
| Gene Ontology(MF) |
GO:0005488 |
binding |
|
| Pfam |
PF08514.6 |
STAG domain |
5.2e-46 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL008506 |
| N. vitripennis |
NV11031-PA |
| H. sapiens |
ENSP00000236698 |
| H. sapiens |
ENSP00000218089 |
| H. sapiens |
ENSP00000400359 |
| H. sapiens |
ENSP00000360202 |
| P. humanus |
PHUM381570-PA |
| H. sapiens |
ENSP00000319318 |
| H. sapiens |
ENSP00000360186 |
| H. sapiens |
ENSP00000372689 |
| H. sapiens |
ENSP00000360199 |
| B. mori |
BGIBMGA004658-TA |
| A. gambiae |
AGAP006998 |
| C. quinquefasciatus |
CPIJ009961 |
| A. aegypti |
AAEL004289 |
| S. invicta |
SI2.2.0_12491 |
| H. melpomene |
HMEL005311-PA |
| P. vanderplanki |
Pv.09526 |
| T. castaneum |
TC014340 |
| S. invicta |
SI2.2.0_15942 |
| H. sapiens |
ENSP00000377586 |
| H. sapiens |
ENSP00000404396 |
| H. sapiens |
ENSP00000397265 |
| D. melanogaster |
FBgn0020616 |
| H. sapiens |
ENSP00000445787 |
| A. mellifera |
GB20029-PA |
| H. sapiens |
ENSP00000360187 |
| H. sapiens |
ENSP00000346555 |
| M. musculus |
ENSMUSG00000036928 |
| M. musculus |
ENSMUSG00000037286 |
| D. plexippus |
DPOGS212366PA |