MidgeBase gene description page [Pn.07175]
Outline
| Gene ID | Pn.07175 |
| Type | Protein coding gene |
| Scaffold | PnScaf6468 |
| Start | 10345 |
| End | 11288 |
| Direction | - |
Sequence
Transcript: 690 (bp)
ATGCTGATGGACGACTCGGCCGTTTTCAATAGCATTCCCGTCGACTACGCTGTCAATGCCTTCATCATGGTCGCCAAGCAAATTGGCACCGAGCGAGAAAGAGCACGAAAAGTCCCCGTCTTCAACGTCACGATTCACAAGGACAACGCTAAAACGTACAGTTACATGTTCACCGAGGTGGAGAAGATGCGCTTTCGCTTCCCGAGCGGCATCATGCTTTGGTACCCGAACATCAAGACCACGACCAACAAGCTCTACTACTGGCTCAACGTGGTTCTCTTCCAGTGGATTCCGGCCCTCTTCGTCGACATGCTGATGTCGATTTTCGGGCAAAAAACTTTCATGATTCGGGCTCAGAAGAGAATAACGATCGGCATGGACGTCCTGAAGTGTTTCACGCTCAACAACTGGGACTTTAGGACGAAGAATTTCGAGGGGCTGCAGAAGAGTCAGTCGGAGGAGGAGCAAGAGATGTTCTTTATTGATACGAAAAAAATCGACATAAATCAATATTATGCGGACTCGATTGCTGGAGGTCGACTGTACATGGGAAAGGAGCCATTGTCTACGCTTCCGAAAGCCATACGGCTCATGAAAATGTTGTACGTGGCTGATCGAACCGTGAAGCTGCTGTTCTTTTACTGGCTGGTGAAGAAATTACTCACACTGACTGGATTTGTCGAAGCTTCA
Protein: 230 (aa)
MLMDDSAVFNSIPVDYAVNAFIMVAKQIGTERERARKVPVFNVTIHKDNAKTYSYMFTEVEKMRFRFPSGIMLWYPNIKTTTNKLYYWLNVVLFQWIPALFVDMLMSIFGQKTFMIRAQKRITIGMDVLKCFTLNNWDFRTKNFEGLQKSQSEEEQEMFFIDTKKIDINQYYADSIAGGRLYMGKEPLSTLPKAIRLMKMLYVADRTVKLLFFYWLVKKLLTLTGFVEAS
| Type | Start | End | Length |
| CDS |
10348 |
10438 |
91 |
| CDS |
10513 |
10638 |
126 |
| CDS |
10695 |
10826 |
132 |
| CDS |
10886 |
11125 |
240 |
| CDS |
11188 |
11288 |
101 |
| intron |
10439 |
10512 |
74 |
| intron |
10639 |
10694 |
56 |
| intron |
10827 |
10885 |
59 |
| intron |
11126 |
11187 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002050641 |
GJ22271 [Drosophila virilis] gb|EDW61834.1| GJ22271 [Drosophila virilis] |
2e-41 |
| InterPro |
IPR004262 |
Male sterility |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
|
| Pfam |
PF03015.14 |
Male sterility protein |
1.5e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes