MidgeBase gene description page [Pn.07153]
Outline
| Gene ID | Pn.07153 |
| Type | Protein coding gene |
| Scaffold | PnScaf6450 |
| Start | 32143 |
| End | 37346 |
| Direction | + |
Sequence
Transcript: 2109 (bp)
ATGTTCAAAAGCCTAGCATTTGACCTTCAATTTGCTTTTTATTTTCTGTACCATTTTCTGAAGGGTGATGAATTAAGCAACACACCAACGTCGACCGCCACTACCACGCTCGCTGGACTGCTAACTACCGGATACTTAAATGACTCAAACAAGAATTCAAACGCAGACAGCAAAACAACGACGAGAGAGTCGAGAGGACGAAGTGTGGGAGGAGGCCCGATGCGTTCACGACGGAATATTGACACATCACCTTACGGCAGTAACAACAATGCTTACCTAAGCCCACCGCAAGAGTCGAGTTGGAGAAGGACGTCCTCCGACTCCGCTATTCACCAGAGTTTAACGCAGGCTCAAGACATGCATAACAATGTTCACCAATCACTAATGCTAAGTCCACGCGCTCACAAGCGATTGTCAAACAGTCAGAGTAACAGCATGAAAAATCTTCATCATCAACAACAGCAGTCGATTAATCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAGCAGCAACAGCAGCAGCATAGTCTCAGTCAACAGAACATGCAACAGACGGCGACAATTCTTTCGCAGCAAGCACTCCTGCACCAGCAGAATATTCCTCAACAGCACTTGGTGATGAACAACCTCCAACAAGACATGAAATCGAGATCTGTCTCGCGACTGCCAGGAATACATGTTTATCCAACGTCTCAAAACGACGAGTTGCTCCAGATACCTGTCGGAAACAGTACTGGCTCTCTGCCCGACTTGACTCTAGTGCATTTTCAACAGTCGCCCATTTCGAACCCGCTCGATCCCCAAGAACAGCAGCACCTTATCACGGCAGTCACCAGCTCGTTTACCACCAACCCATCATTCTCAATGGCAAGCACAAATCATCATCAACAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAACAACAAATGTTTACACAAATGGGAAATAATCTCGATCAATTCAGTCCGAAGCATTTTAATAGTAATAGTAATAATAGTAATAACGGCAGCAACAACAAAGGTTCATCTAGTCAGAGTATATTACTTCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAACAAGGAGGACCCAACTTCGCTCAGCAGCAGCAGCAGCAATCAAATCCAATACCGATTGACACGAGTCAACGACAACAGCAACAGCAATCGCCACTACATCATCAGAGCTACCCGAACCAGATATCCGTAGACAAAATGATGAGTTACCGAAGCTCCAACACAGCTTCACCCGCCAATTTGTCTCTGTCACAGGGCAATTTATCAAAACAGAATAGCTATCGAACTCAAAACAGTCCGAACCACCGGCCGAGTCCGGGATCGAGTCCCCTTGGGAGCATACCGGGCCTTACGGCAAACTTCGACTCCAACTCGAGTGCACCTTGCAGTCCCTCGCCGCAAATGACATCAAACAATGGACAATTTGATACTTATCCATCAGTTGATAGTTTTTATCTTAATCCAACAATTCAGCAACATTTTGAACAGTTCTCATTAATGAATGATAATTATAATGGAATTCTAAACGATAGCCCGAATCGGACCAATCAATCACCAACGAATCGTTCCCGACCGAGTTCACGAGCAAATCATCATACGACAAATAGCAATCATCAGCAACAGCATTCGAATAACAATAACACGAACGGAGGAGGAGGGTCAAGTCCGCACAGCCCACTCGGCAGCGACACAATGCTGGCGGGCAACAATTATGACAATTTAAGGAGCATGTTGGGCTCATCGCCACTCGACGGCGCACTCTTGAACGGCATCAACAACAGCAACAGTGGCGTGAATGATATTATGCTTGGTGCAGGCATCGGAAGCGACTCAAATTGCTCGAAACCAACGAGCATGTCGACATCCTCTCCCTCACATCCACTCACTCAAGCAACGACTGCCATACCAGAAATTGTTTTCTCAGATTATTCATCGGGATCGGTGGATTTCACACGCGACTTACTGTCAGTTGACAATTTCTTAGAGCTTGGCATGAACACAACCGAACTGCAGATGTTTGAAAATGCCAATATCATAGATCCAACGATAGAAGAGAACTTTAGACGCGATTTATAT
Protein: 703 (aa)
MFKSLAFDLQFAFYFLYHFLKGDELSNTPTSTATTTLAGLLTTGYLNDSNKNSNADSKTTTRESRGRSVGGGPMRSRRNIDTSPYGSNNNAYLSPPQESSWRRTSSDSAIHQSLTQAQDMHNNVHQSLMLSPRAHKRLSNSQSNSMKNLHHQQQQSINQQQQQQQQQQQQQQQQQQHSLSQQNMQQTATILSQQALLHQQNIPQQHLVMNNLQQDMKSRSVSRLPGIHVYPTSQNDELLQIPVGNSTGSLPDLTLVHFQQSPISNPLDPQEQQHLITAVTSSFTTNPSFSMASTNHHQQQQQQQQQQQQQQQMFTQMGNNLDQFSPKHFNSNSNNSNNGSNNKGSSSQSILLQQQQQQQQQQQQQQGGPNFAQQQQQQSNPIPIDTSQRQQQQQSPLHHQSYPNQISVDKMMSYRSSNTASPANLSLSQGNLSKQNSYRTQNSPNHRPSPGSSPLGSIPGLTANFDSNSSAPCSPSPQMTSNNGQFDTYPSVDSFYLNPTIQQHFEQFSLMNDNYNGILNDSPNRTNQSPTNRSRPSSRANHHTTNSNHQQQHSNNNNTNGGGGSSPHSPLGSDTMLAGNNYDNLRSMLGSSPLDGALLNGINNSNSGVNDIMLGAGIGSDSNCSKPTSMSTSSPSHPLTQATTAIPEIVFSDYSSGSVDFTRDLLSVDNFLELGMNTTELQMFENANIIDPTIEENFRRDLY
| Type | Start | End | Length |
| CDS |
32143 |
32338 |
196 |
| CDS |
32460 |
32617 |
158 |
| CDS |
32690 |
33018 |
329 |
| CDS |
33079 |
33250 |
172 |
| CDS |
33324 |
33512 |
189 |
| CDS |
33633 |
33890 |
258 |
| CDS |
33960 |
34108 |
149 |
| CDS |
34182 |
34260 |
79 |
| CDS |
36697 |
37123 |
427 |
| CDS |
37192 |
37343 |
152 |
| intron |
32339 |
32459 |
121 |
| intron |
32618 |
32689 |
72 |
| intron |
33019 |
33078 |
60 |
| intron |
33251 |
33323 |
73 |
| intron |
33513 |
33632 |
120 |
| intron |
33891 |
33959 |
69 |
| intron |
34109 |
34181 |
73 |
| intron |
34261 |
36696 |
2436 |
| intron |
37124 |
37191 |
68 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001843056 |
hypothetical protein CpipJ_CPIJ001572 [Culex quinquefasciatus] gb|EDS30331.1| hypothetical protein CpipJ_CPIJ001572 [Culex quinquefasciatus] |
4e-25 |
| InterPro |
IPR024784 |
Transducer of regulated CREB activity, middle domain |
|
| Pfam |
PF12885.2 |
Transducer of regulated CREB activity middle domain |
7.5e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV17963-PA |
| P. vanderplanki |
Pv.10342 |
| T. castaneum |
TC009383 |