MidgeBase gene description page [Pn.07143]
Outline
| Gene ID | Pn.07143 |
| Type | Protein coding gene |
| Scaffold | PnScaf6426 |
| Start | 15716 |
| End | 21491 |
| Direction | - |
Sequence
Transcript: 3129 (bp)
ATGCCAATTGTTAAAAACAGATCTAACAACATTCAATCATTGCACGGAAGCGATGGAAACGACAAAGACAAAGGAATCTTCAACGTATCGCGCGTTAAGAAAATTGAGTTATCGGAAATTCCACTTGCAACGGTGGCATCTTCATCATCATCTTTAGTTGCATCAACTTCAGTGACGTCTAACGATCAACTGTCAACACAAAGACCGTCATCTAATGGAGGAAGCAATGTTCTTAATCGAGTCATTTCACTAACAACCGCAAATCAAAACAATGACAACAATTATTTAAAACAAACCAAAACTTCCTTCATTCCGGAGAAATTGCAATTTTCTGCATATGAAAAATTTGAAGGCCAAATGTTGTTAAATTGGTTTGTTCAGTCAGTTCCTTCGACGCTCTCAGTAATACTTAATGAGAGTGATTTAAACGCCCTCACAATGCAATATTGTACGAACTTATTGATTGCCGGCATTATAAAGCCGCTGGATACGCCTAGTACTAATTACAATGAAGTTTTCAAGTCAAATGTTATGTATCAATGGACGCATAAGGAACCGACAATAATATCAAACTTACCGGGAAAGCTAGGGGCTTCTTCATGGTCTAATAACAGTAATGCAAGTATTAACGTTGCTAGAAAACCAGCAGACACAAGCGGAGGTTCTTCAACATCAAGTCCCAAGCGTGATGGAGAATCGAAAATTCCCAAGCTAGTATCGAATTTTACTTCAACGCCAAAACCTCGCCTTCAATCATCATTTGGTAGTTTATATGCGACTGAAAACTCAATATTGTTCAATGAATTTGATCAACAGCAAAAAAGTAAGATCTCTGAACTGAAAATCAAGTTGAGTAAGTGTGAAACCGTACAAGAGACGCTAGTGTTGATACGAAGCTTTCTTAGCGAACATGCTATGCAATCGTCTGAATCTAGCACAAACAGTGGAAGTCTTGCTGCTCTAACCAACTCATTAATTAACGGATCTGATACAACTATTTTTGATAAAAGTCTAGACAGCTCGCTCAATACAATCGTTACAAGTATTTCTCAACAGAAAAGATCGTCTCCTATTCATGTTCCGAAGACATCGCGGACTCCGCCTAAATCGAGAACTATGCCAAGCACGCCAACATCGTCGTCATCTTTTTCAACGACAAAGCGACTTCGAAAAAACAACTCCGCAGACTCGGTTTCATCTAGTGTTACGAATAATCATTCGAATGGTATACTCTGCAGAAAGTGCATGCTCATCTCAACATCGCCAACGAAGACGGCAAAGAGATATGTGGATAAGGCGACAGTTATGGATGTTGAGCCAATTGTTTTTCCGAAGCCCGTAGAAATTAAATCTGTGGAGATTCAAACTGATCCGATTCTGTTTGACAGCGATGAGAAAAGAACTGATGATGTGGAGTTGAAGAAAGAAAATCAGGTTGAAACTCCTATTGAAAAGTCTGAACCTATGCCTCCGCCTGCGCCACCACCACCTGCTCCTGCACCTCCACCGCCTCCTCCTTTTCTCTCGAACTCCAAGCCACCAGGACCACCTCCACCTCCTTTAATGAACGGAAATGTTCCACCTCCTCCTCCTCCAGGTTTTGCGAAAGGGCCCTGTCCTTTACCGCCGCCCATCGCTCTCTCTGCAGGCCCAGGTAATAAATTATCGCAATCACCATCATCAAATCCATCAAACTTGACAATGAACGGAAAGCCAAGACCGCCTGCCCCATTGCCTTTGCCAGCTTCCGATTTTTATCAGACGAATACGTTGAGGAAGAATGCGGTGAATCCGCCCAAGCCCATGAAGCCTCTCTATTGGACGCGAATCGTGACCCCGATAATTCCTCAAGACTCGGTTGATGGTAGCGGTGAAGAGGACGAGAAGAAGATTAGTGAGAAGGACGAGTTGTGGAAGGAAATCGACGAAACAAAGCTTGACAATCTCGACGAATTCACAGAGCTCTTTTCGCGGCAGTGTGTTGTGCCCAAGGCAAAAGATAAAACACCTTTGCCGAAAGTGAAGACGATAAAAGTATTGGACAGCAAGCGGTCGCAGAATGTGGGAATCTTTGTTCGAAGCATTCACGTAGACTTTGTAGAAATCGAACACGCCATTTATGAATGCGATACTTCGGTCGTGAGTCAAGAAACTCTGCAAAATATCATGTCAATTAAGGCAACTAACGACGAACTGGCGATGATCAAGGAGGCTGTCGAAGCACATAGCAGCAATGACAGCTTGATTCCTCTCGACACTCCCGAACAATTCCTTTTGAAATTATCACAAATTTCATCGTCAGCCGAACGAATTTCATGTATTGTTTTCCAAGATGAATTTGAGGAGCAATGCGTAATGGTCTCACGAAAACTGATTGTTGTGAAGGGCTTATGTGAATTTCTGTTAGAAAGCGAAGAGCTTAAAGAGGTGTTTTCCATTATTTTGACGCTCGGTAATTTTATGAATGGAGGAAATCGGCAGCGGGGCCAGGCTGATGGTTTTGGTCTTGAGATATTAGGCAAATTAAAAGACGTTAAGTCCCGAGATCCGAAAATAACGCTTCTACATTTTATTGTCAAAACTTTTATTGCTCGTTCGAGACAAAACGGTGTAGCAATAACTGATTTGAAACTTCCAGTTCCCGATCCGAATGATGTTGACAAGAGCCTTTCCATTGATTTTGAAGAATGTAAACAACAATTGAATACATTAAAGAACAAAGTTGAAGAATGCAAGAAGACAACTGAAAGGGTGATAGCAGATTCATCAGAGCAACATATTCAGCCCTTCAAAGATAAAATGGAATCTTTTATTAATATGGCCGCACAAAGAATTGAGAGTCGTTTCTGCAAGGTCGAAGAGTGTAAAGTTTTGTTCATAAAAACCCTAAAATTTTATAAATACATGCCGAAGACTGGACCAATTGAGGAAGCGACTCCGGCACAATTTTTTGAGTATTGGACTTCATTCACTAGTGACTTTAATGGGATATTCAAGAAAGAACTTTTAATTCTTACAAACGAGCTGTATAAAAAATCACGGCAGGTGACAAAACCACAGTCAAAACCAGCGTCTTCTAGCGAGAACACCCTTAAAGCACGCATTAATCGTCTTAAGAATCGTGATAAA
Protein: 1043 (aa)
MPIVKNRSNNIQSLHGSDGNDKDKGIFNVSRVKKIELSEIPLATVASSSSSLVASTSVTSNDQLSTQRPSSNGGSNVLNRVISLTTANQNNDNNYLKQTKTSFIPEKLQFSAYEKFEGQMLLNWFVQSVPSTLSVILNESDLNALTMQYCTNLLIAGIIKPLDTPSTNYNEVFKSNVMYQWTHKEPTIISNLPGKLGASSWSNNSNASINVARKPADTSGGSSTSSPKRDGESKIPKLVSNFTSTPKPRLQSSFGSLYATENSILFNEFDQQQKSKISELKIKLSKCETVQETLVLIRSFLSEHAMQSSESSTNSGSLAALTNSLINGSDTTIFDKSLDSSLNTIVTSISQQKRSSPIHVPKTSRTPPKSRTMPSTPTSSSSFSTTKRLRKNNSADSVSSSVTNNHSNGILCRKCMLISTSPTKTAKRYVDKATVMDVEPIVFPKPVEIKSVEIQTDPILFDSDEKRTDDVELKKENQVETPIEKSEPMPPPAPPPPAPAPPPPPPFLSNSKPPGPPPPPLMNGNVPPPPPPGFAKGPCPLPPPIALSAGPGNKLSQSPSSNPSNLTMNGKPRPPAPLPLPASDFYQTNTLRKNAVNPPKPMKPLYWTRIVTPIIPQDSVDGSGEEDEKKISEKDELWKEIDETKLDNLDEFTELFSRQCVVPKAKDKTPLPKVKTIKVLDSKRSQNVGIFVRSIHVDFVEIEHAIYECDTSVVSQETLQNIMSIKATNDELAMIKEAVEAHSSNDSLIPLDTPEQFLLKLSQISSSAERISCIVFQDEFEEQCVMVSRKLIVVKGLCEFLLESEELKEVFSIILTLGNFMNGGNRQRGQADGFGLEILGKLKDVKSRDPKITLLHFIVKTFIARSRQNGVAITDLKLPVPDPNDVDKSLSIDFEECKQQLNTLKNKVEECKKTTERVIADSSEQHIQPFKDKMESFINMAAQRIESRFCKVEECKVLFIKTLKFYKYMPKTGPIEEATPAQFFEYWTSFTSDFNGIFKKELLILTNELYKKSRQVTKPQSKPASSSENTLKARINRLKNRDK
| Type | Start | End | Length |
| CDS |
15719 |
15821 |
103 |
| CDS |
15903 |
16200 |
298 |
| CDS |
16264 |
16335 |
72 |
| CDS |
16398 |
16695 |
298 |
| CDS |
16775 |
17364 |
590 |
| CDS |
18053 |
18277 |
225 |
| CDS |
18339 |
19359 |
1021 |
| CDS |
19439 |
19608 |
170 |
| CDS |
20896 |
21084 |
189 |
| CDS |
21329 |
21491 |
163 |
| intron |
15822 |
15902 |
81 |
| intron |
16201 |
16263 |
63 |
| intron |
16336 |
16397 |
62 |
| intron |
16696 |
16774 |
79 |
| intron |
17365 |
18052 |
688 |
| intron |
18278 |
18338 |
61 |
| intron |
19360 |
19438 |
79 |
| intron |
19609 |
20895 |
1287 |
| intron |
21085 |
21328 |
244 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001656495 |
formin 1,2/cappuccino [Aedes aegypti] gb|EAT45580.1| formin 1,2/cappuccino [Aedes aegypti] |
1e-158 |
| InterPro |
IPR003104 |
Actin-binding FH2/DRF autoregulatory |
|
| InterPro |
IPR015425 |
Actin-binding FH2 |
|
| Gene Ontology(BP) |
GO:0016043 |
cellular component organization |
|
| Gene Ontology(BP) |
GO:0030036 |
actin cytoskeleton organization |
|
| Gene Ontology(MF) |
GO:0003779 |
actin binding |
|
| Pfam |
PF02181.18 |
Formin Homology 2 Domain |
2e-94 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000318884 |
| H. melpomene |
HMEL017880-PA |
| M. musculus |
ENSMUSG00000028354 |
| C. quinquefasciatus |
CPIJ003134 |
| N. vitripennis |
NV18330-PA |
| H. sapiens |
ENSP00000437918 |
| B. mori |
BGIBMGA010336-TA |
| D. plexippus |
DPOGS208548PA |
| A. gambiae |
AGAP010183 |
| D. melanogaster |
FBgn0000256 |
| P. vanderplanki |
Pv.02254 |
| A. mellifera |
GB10982-PA |
| S. invicta |
SI2.2.0_11590 |
| P. humanus |
PHUM602670-PA |
| T. castaneum |
TC012258 |
| A. aegypti |
AAEL003162 |