MidgeBase gene description page [Pn.07074]
Outline
| Gene ID | Pn.07074 |
| Type | Protein coding gene |
| Scaffold | PnScaf6340 |
| Start | 25039 |
| End | 25644 |
| Direction | + |
Sequence
Transcript: 255 (bp)
ATGAAATTTTTAATGGCACGAAAAGAATCGCAGACACAGGAAATTGTGGAGAATGCCTTAGGGGAAATGAAGAAGATCTACAAATCCAAGCTTCTGCCACTCGAAGAGCATTATAATTTCCATGATTTTCATTCACCGAAGCTCGAGGATCCCGATTTCGATGCAAAGCCGATGATTCTGCTCGTCGGTCAATATTCGACTGGAAAGACGACCTTCATCCGCTATCTTTTGGAGAGAGACTTTCCTGGAATTAGG
Protein: 85 (aa)
MKFLMARKESQTQEIVENALGEMKKIYKSKLLPLEEHYNFHDFHSPKLEDPDFDAKPMILLVGQYSTGKTTFIRYLLERDFPGIR
| Type | Start | End | Length |
| CDS |
25039 |
25062 |
24 |
| CDS |
25272 |
25388 |
117 |
| CDS |
25450 |
25555 |
106 |
| CDS |
25634 |
25641 |
8 |
| intron |
25063 |
25271 |
209 |
| intron |
25389 |
25449 |
61 |
| intron |
25556 |
25633 |
78 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001654538 |
past-1 [Aedes aegypti] gb|EAT37607.1| past-1 [Aedes aegypti] |
3e-36 |
| InterPro |
IPR001401 |
Dynamin, GTPase domain |
|
| Gene Ontology(MF) |
GO:0005525 |
GTP binding |
|
| Gene Ontology(MF) |
GO:0003924 |
GTPase activity |
|
| Pfam |
PF13555.1 |
P-loop containing region of AAA domain |
0.074 |
| Pfam |
PF09439.5 |
Signal recognition particle receptor beta subunit |
0.015 |
| Pfam |
PF01926.18 |
50S ribosome-binding GTPase |
0.11 |
| Pfam |
PF08477.8 |
Miro-like protein |
0.0012 |
| Pfam |
PF03205.9 |
Molybdopterin guanine dinucleotide synthesis protein B |
0.017 |
| Pfam |
PF02367.12 |
Uncharacterised P-loop hydrolase UPF0079 |
0.015 |
| Pfam |
PF06414.7 |
Zeta toxin |
0.14 |
| Pfam |
PF13238.1 |
AAA domain |
0.12 |
| Pfam |
PF00735.13 |
Septin |
0.1 |
| Pfam |
PF00350.18 |
Dynamin family |
3.4e-05 |
| Pfam |
PF13401.1 |
AAA domain |
0.03 |
| Pfam |
PF13521.1 |
AAA domain |
0.025 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000403830 |
| H. sapiens |
ENSP00000399022 |