MidgeBase gene description page [Pn.07061]

Outline

Link to gbrowse

Gene ID Pn.07061
Type Protein coding gene
Scaffold PnScaf6317
Start 78
End 452
Direction +

Sequence

Transcript: 372 (bp)

 ATGTCGGATAAGTCGATGATGCTGTGGTGGTTCTGCCGCATCTACCTGTACGTCTTCATCAGCCTGTACATCTACGTGGTGCTGTCGCTGTTCATTTCGGTGATTATGGATAGCTACGACACGATAAAGCGCTACTACAGCGACGGCTTTCCGCAGAGCGATCTGCGCGAGTTTATGGGCGTAACGAACATTAGCGACTTGTCGTCGGGCATTTATCGCGATGACGATGTCGATGATGACGAGGCGATTGGCGAGACGCTCAAGAAGATGTTCTGCTTCTGGAGGCATCCTCTCGGCGATGACACGGTGTTGTCGTCGTCGTCGACCGAATATCGAACCTTGCCTAAACCATCCGTGTCGTCGGCGACCTAT 

Protein: 124 (aa)

 MSDKSMMLWWFCRIYLYVFISLYIYVVLSLFISVIMDSYDTIKRYYSDGFPQSDLREFMGVTNISDLSSGIYRDDDVDDDEAIGETLKKMFCFWRHPLGDDTVLSSSSTEYRTLPKPSVSSATY 
Type Start End Length
CDS 78 449 372

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr XP_001653550 mucolipin [Aedes aegypti] gb|EAT47288.1| mucolipin [Aedes aegypti] 2e-34
Pfam PF08016.7 Polycystin cation channel 0.25

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID
Pn.12500

Orthologous genes

Species Gene ID
C. quinquefasciatus CPIJ011507
A. mellifera GB18634-PA
H. melpomene HMEL013941-PA
H. sapiens ENSP00000342698
H. sapiens ENSP00000359620
H. sapiens ENSP00000359640
H. sapiens ENSP00000284027
H. sapiens ENSP00000436299
S. invicta SI2.2.0_01440
N. vitripennis NV11492-PA
H. sapiens ENSP00000359619
H. sapiens ENSP00000359621
P. humanus PHUM586230-PA
P. vanderplanki Pv.00425
A. aegypti AAEL001557
A. gambiae AGAP007710
H. sapiens ENSP00000304843
M. musculus ENSMUSG00000011008
D. melanogaster FBgn0262516
T. castaneum TC005682
D. plexippus DPOGS212315PA
H. sapiens ENSP00000377856
D. melanogaster FBgn0261361
H. sapiens ENSP00000264079
B. mori BGIBMGA012072-TA