MidgeBase gene description page [Pn.07007]
Outline
| Gene ID | Pn.07007 |
| Type | Protein coding gene |
| Scaffold | PnScaf6274 |
| Start | 34056 |
| End | 40308 |
| Direction | + |
Sequence
Transcript: 2451 (bp)
ATGAGTCCCAAGCAATGGCTCTCGCTGCTGACATTTTATATTTTATATCTGATATTCGGTGCCAGTGTTTTTTACCATATTGAACACAAATTGGAAACTCAGCGGCGAATAACAGCCAACAATGAACGGATTGAAATTAATGCTCTTCTGAAAAAGTATCTCGTAAACAATACCGAGATACAGGATGAAATTTTGGACGAAGTCTCGGAGTACTGTGGCCGGCCTGTAACGCATCCCTCCCAAGATGAATATGTGCCACCTTACATTTGGAGCTTTTATCACGCATTCTTCTTCTCCTTCACTGTTTGTTCAACCGTTGGCTATGGAAACATTTCTCCGACAAATTCGTTGGGTCGCTTGTTTTTAATATTTTATGGACTCGTTGGATTACCAGTTCATGCAATACTGTTCGCATACATGGGCAATTTCTGGGGCAATACGTTTGTAAACATGTATAGAAGATATAAAGAATACAAGATGTCGATGGATAGCAATTGGGTACCGAGGAAAGTCAGCTTGATTGGAAGGATTTCGCTGTATCTCGTCCCGGGTATCGCGATGTTCATCTTTGCTCCCGCCATGATATTTTCGTACTTTGAAGGATGGGACTACTTGATCTCGGTGTACTATGCTTTCGTTACGCTCACAACCATCGGCTTGGGAGATTTCGTCGCCACCTTTCAGAAGCATCAGGAGAAAACATTCGGTACTCTCTTCGTTTGCTATCAACTGTTCATTTTATGTTGGTTCATAGCAGGAGTAAGTTACATCGCTATGATTATAGGATTTCTTATCAAAGGTTTAAGGAGCAAGAAAATCAAGAAAATCGAACACAACCTCGCTATAAACATCAAGGAAACCCAGAGGAAAATTTGGCATGGCGTTCAGCGAGACGTGGGTTATATCAGGAAGATCCTCAATGAAGTGTATTTCTCAAAGTTTAAGCCAATTTATAAAGATCCTGATGAAACAAAGAAGAGCTTCCGCATTCCCCGTTCCCAGTCGTGTCCGCATTTATTCTTAAATATCGACGCTAACGACGAAACGGAGGACGGGGGATTTATTTCGAGAGCAGCAGAGAACAAGCAGCGACGCTACGTACCCGAGCATTTTAAATCAAGACAGAGACGACAGCGAAGTGCCAGTGCCATAACAATCTACCGTCCCCAATCGGATACCGACTTGAGCCACATCGATCGTGTGAAGACATTCGATGCGAAGCAGGCGACCCTCGAGCCGGCTGAATTATTGGCAAAAGTAACAATTGCACTGAGCGCCTATCGAAAAGATGTCGACGATAAAGATGTAAATGAACTCGGTGGCATACACGGCTTCAGTGATTCACAAATTTTAGCAAGCGAGCAATTTCACTCGGATTGGTCAATCGAAACATCTGAGCAGAACATGGAAATGTACGGACGAAATCGACGTGCCCTTTCCGAAGTGCGCATTCCAATGGAGGAATCAGCAAAGGCATTATCAAATGAATGGACATGGTCCGGAGCAAATACACAAATAACTGAAATAGAAAGGATACGCTCAAGAATGTCGAAGCCGAGAAAGAGCCTTTACCGAGCGTCGCTCGAAACGAAACTACGAAGCAAGTCAGATGCGGTCGATGATTTCTCGAGAGAATTCTCTCACATAAACGAAGCAGTTACAAACAAATCAAAGCTCCGAAAATTAAATCTCTTCAAGAGGAGGAAAATTCCGGAGGCCATGAAGCGACACTCGCTCGCTCCCAGTCAAGACTTCTTTCCGCACCGATACATGGACCGAAGGGATTCCGCTAATAGTGTTGTAACGGGAAATTATTTAAATCACGCGCGAGCGAGTATTTTCTCGATGCCCTGCTACGAGGAGGAGCAGAGCTTATTGGAGACAACGAGCGTTGCGGATTTAATTAGAGCCATTGAAATGCTTCACATTGACAACATTGTCGAAGAGGATCCCGGCGAGATGCAGACACAGCCGAGGCAAATGGGCGCGGAGCATTTATCCCATAATCTTTCTTTATTAACTCTTTTGAAAAATAATCATCATTCTAGTCACACAATACACGGACCCACTGCAGACATCTCACCTAAACTGGGCGAGCGACAAAGGCCGAGATTATATAGCTGCTATGCCGCTGTGACGGGGGAAAATTTTCACTCGGACGACAAAAGTTTAGAAGACGCTAATCCATTTAATAGACGGCAATCCATCTCCATGCACATCCCACCGCCGCCCTACAGTCCGACAAAAACTCTTAAAAATGATTCATTAAAGGCGACAGTAAAGCGACGCTTCAGCGTCCGTCCCTCAAGTCTTGAAAAATCACCTGGACAATTTCACAAAGTTCCAAACTTGCAAGTAATTGCCAGCTCCTCATCGGCAGCACAGCAGTGTCAATCCGCACAATCGTCCCCGGTTTCTGTAACGAAAAAAATTCGCACAATGAGAAAATTC
Protein: 817 (aa)
MSPKQWLSLLTFYILYLIFGASVFYHIEHKLETQRRITANNERIEINALLKKYLVNNTEIQDEILDEVSEYCGRPVTHPSQDEYVPPYIWSFYHAFFFSFTVCSTVGYGNISPTNSLGRLFLIFYGLVGLPVHAILFAYMGNFWGNTFVNMYRRYKEYKMSMDSNWVPRKVSLIGRISLYLVPGIAMFIFAPAMIFSYFEGWDYLISVYYAFVTLTTIGLGDFVATFQKHQEKTFGTLFVCYQLFILCWFIAGVSYIAMIIGFLIKGLRSKKIKKIEHNLAINIKETQRKIWHGVQRDVGYIRKILNEVYFSKFKPIYKDPDETKKSFRIPRSQSCPHLFLNIDANDETEDGGFISRAAENKQRRYVPEHFKSRQRRQRSASAITIYRPQSDTDLSHIDRVKTFDAKQATLEPAELLAKVTIALSAYRKDVDDKDVNELGGIHGFSDSQILASEQFHSDWSIETSEQNMEMYGRNRRALSEVRIPMEESAKALSNEWTWSGANTQITEIERIRSRMSKPRKSLYRASLETKLRSKSDAVDDFSREFSHINEAVTNKSKLRKLNLFKRRKIPEAMKRHSLAPSQDFFPHRYMDRRDSANSVVTGNYLNHARASIFSMPCYEEEQSLLETTSVADLIRAIEMLHIDNIVEEDPGEMQTQPRQMGAEHLSHNLSLLTLLKNNHHSSHTIHGPTADISPKLGERQRPRLYSCYAAVTGENFHSDDKSLEDANPFNRRQSISMHIPPPPYSPTKTLKNDSLKATVKRRFSVRPSSLEKSPGQFHKVPNLQVIASSSSAAQQCQSAQSSPVSVTKKIRTMRKF
| Type | Start | End | Length |
| CDS |
34056 |
34197 |
142 |
| CDS |
36513 |
36572 |
60 |
| CDS |
36636 |
36752 |
117 |
| CDS |
36953 |
37018 |
66 |
| CDS |
37101 |
37156 |
56 |
| CDS |
37364 |
37577 |
214 |
| CDS |
37684 |
37785 |
102 |
| CDS |
37924 |
37963 |
40 |
| CDS |
38027 |
38174 |
148 |
| CDS |
38446 |
38973 |
528 |
| CDS |
39328 |
40305 |
978 |
| intron |
34198 |
36512 |
2315 |
| intron |
36573 |
36635 |
63 |
| intron |
36753 |
36952 |
200 |
| intron |
37019 |
37100 |
82 |
| intron |
37157 |
37363 |
207 |
| intron |
37578 |
37683 |
106 |
| intron |
37786 |
37923 |
138 |
| intron |
37964 |
38026 |
63 |
| intron |
38175 |
38445 |
271 |
| intron |
38974 |
39327 |
354 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001687831 |
AGAP002224-PA [Anopheles gambiae str. PEST] gb|EDO64818.2| AGAP002224-PA [Anopheles gambiae str. PEST] |
1e-160 |
| InterPro |
IPR003280 |
Two pore domain potassium channel |
|
| InterPro |
IPR013099 |
Ion transport 2 |
|
| Gene Ontology(BP) |
GO:0071805 |
potassium ion transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005267 |
potassium channel activity |
|
| Pfam |
PF07885.11 |
Ion channel |
1.5e-25 |
| Pfam |
PF05184.10 |
Saposin-like type B, region 1 |
0.13 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS208524PA |
| H. sapiens |
ENSP00000362324 |
| H. melpomene |
HMEL011488-PA |
| N. vitripennis |
NV14433-PA |
| A. gambiae |
AGAP002224 |
| H. sapiens |
ENSP00000415375 |
| H. sapiens |
ENSP00000362326 |
| P. humanus |
PHUM129260-PA |
| P. vanderplanki |
Pv.04363 |
| A. mellifera |
GB19443-PA |
| P. vanderplanki |
Pv.02085 |
| S. invicta |
SI2.2.0_09742 |
| H. sapiens |
ENSP00000391498 |
| T. castaneum |
TC008009 |
| B. mori |
BGIBMGA008375-TA |
| D. melanogaster |
FBgn0017561 |
| M. musculus |
ENSMUSG00000023387 |
| C. quinquefasciatus |
CPIJ001990 |
| A. aegypti |
AAEL013184 |